PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028062123.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Trihelix

Protein Properties

Length: 455aa MW: 51768.8 Da PI: 5.9557

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028062123.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	64.1	3e-20	123	219	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 +Wt++ v++Li+++ ++++ ++ +kk++W+ vsk m ++g+ +sp+qC++k+++lnkrykk++++ +++ ++++++ + d XP_028062123.1 123 KWTDNIVRLLIAVVACVGDDGTLDSveglkrksgalQKKGKWKTVSKIMISKGCYVSPQQCEDKFNDLNKRYKKLNDILGRGtSCRVVEDPTLMD 217 7************666666644334455555677*******************************************95577777776666 PP trihelix 84 ql 85 ++ XP_028062123.1 218 SM 219 66 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MENSGLGGGF LSGPSGGFLD LESSIQRHQQ THHHHRHMQS PINMISGLEN DHSIEFMEAK 60 GSTTHKGFPI NFGKGKAVVS GNAGNSNNNN TSEEDEPSYT EDGNGENFSG GKGKKGSPWQ 120 RMKWTDNIVR LLIAVVACVG DDGTLDSVEG LKRKSGALQK KGKWKTVSKI MISKGCYVSP 180 QQCEDKFNDL NKRYKKLNDI LGRGTSCRVV EDPTLMDSMP QLSAKMKEVV RKILSSKHLF 240 YKEMCAYHNG QRMPNCNDLD LQVHSLPLVR YSKDNNGSEE EEAGENGESE SDESDDEDKN 300 ITGGDMERIG EYGEHKKPNE EDCSIWSQSS ALGGFEAEMT EIFQDPTKSQ WEKRDWIKKQ 360 MLQLQEQRVS IQVEAFELEK RCFKWRRFCS KKERELERSR LENERMILEN ERMALQLKQK 420 ELEMDLKRSD ASFEPTSLNT DRLQERDQID LGKHQ

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MENSGLGGGF LSGPSGGFLD LESSIQRHQQ THHHHRHMQS PINMISGLEN DHSIEFMEAK  60
GSTTHKGFPI NFGKGKAVVS GNAGNSNNNN TSEEDEPSYT EDGNGENFSG GKGKKGSPWQ  120
RMKWTDNIVR LLIAVVACVG DDGTLDSVEG LKRKSGALQK KGKWKTVSKI MISKGCYVSP  180
QQCEDKFNDL NKRYKKLNDI LGRGTSCRVV EDPTLMDSMP QLSAKMKEVV RKILSSKHLF  240
YKEMCAYHNG QRMPNCNDLD LQVHSLPLVR YSKDNNGSEE EEAGENGESE SDESDDEDKN  300
ITGGDMERIG EYGEHKKPNE EDCSIWSQSS ALGGFEAEMT EIFQDPTKSQ WEKRDWIKKQ  360
MLQLQEQRVS IQVEAFELEK RCFKWRRFCS KKERELERSR LENERMILEN ERMALQLKQK  420
ELEMDLKRSD ASFEPTSLNT DRLQERDQID LGKHQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	2e-79	Trihelix family protein