PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028062029.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 450aa MW: 49453.1 Da PI: 8.3187 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.9 | 3.6e-16 | 158 | 203 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++ XP_028062029.1 158 RGHWRPAEDAKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 203 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 55.3 | 1.5e-17 | 210 | 253 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r+++++eE+e+l a++++G++ W+ Iar ++ gRt++ +k++w+ XP_028062029.1 210 RKAFSEEEEERLMAAHRLYGNK-WAMIARLFP-GRTDNAVKNHWHV 253 789*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 450 aa Download sequence |
MANKCVLYAP KNNTNGMSCY TSTKTTVSSS STSSSSSSSS SSSSSSSSPF GAFMGMVLAD 60 MGSLSITPPN LGSASTSVAS SSQESFLCKS SEMENEKSTW GFPFMGEGNG CDCSDGFGEN 120 NEAIDLNASF NEEKKANIYA GSGSAKETDF GQSKLCARGH WRPAEDAKLK ELVALYGPQN 180 WNLIAEKLEG RSGKSCRLRW FNQLDPRINR KAFSEEEEER LMAAHRLYGN KWAMIARLFP 240 GRTDNAVKNH WHVIMARKYR EQSSAYRRRK MAQSVYKRME EDPSLVYTAT RTETPPPPPP 300 PPLPYCFNLS NGGLHHSSPF PFPKFNGGGG EAISSSNVPI HHSGFCAQQT PDLLPGHKSQ 360 KRVIFNRPWD RSGDEPNISY LNHPHQHQAP LVTAMQQSLY HHYPPSFYSD SPKPQASVTE 420 PSSSVTEDRH ASQFKAIAPT FIDFLGVGAT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69560.1 | 5e-77 | MYB family protein |