PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028061963.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GATA
Protein Properties Length: 295aa    MW: 32421.5 Da    PI: 6.8543
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028061963.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA481.7e-15127163135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg+ +  Tp +Rrgp g++tLCnaCGl+++ kg+
  XP_028061963.1 127 CQHCGVGEnsTPAMRRGPAGPRTLCNACGLMWANKGT 163
                     *****99889************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MKTSLQTSLF TVQAVLLLLG ERKIPTGVPT IDVPFNSNNR GVDDNQKCSN ISRRIASLVR  60
FREKRKERCF DKKIRYTVRK EVAHRMHRKN GQFASLKENS ATSSWDSTKS CLQGDGTPRP  120
ETVVRRCQHC GVGENSTPAM RRGPAGPRTL CNACGLMWAN KGTLRDLSKG GRNLCLDQIE  180
PETPVDIKPS IIEGENFCGN QDNPGTPDDP SKVVTGETGS PVNPDEEDLC GIAEDHTNSL  240
AVGIINSSCN LDEQETLVEL VNICSETEID IPANFSVDFF KRKSKQELVG ASNGE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.21e-57GATA family protein