PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028061957.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GATA
Protein Properties Length: 348aa    MW: 38056.9 Da    PI: 4.5337
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028061957.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA47.72.2e-15180216135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg+ +  Tp +Rrgp g++tLCnaCGl+++ kg+
  XP_028061957.1 180 CQHCGVGEnsTPAMRRGPAGPRTLCNACGLMWANKGT 216
                     *****99889************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MEAVNPQPLQ ALPYEDHLVF PTEDDGDDYD DGGDGDDGMD EAEDEHVTSV NASDHHHHYY  60
GGGGGVVVAS RTSELTLAFE GEVYVFPAVT PEKGVDDNQK CSNISRRIAS LVRFREKRKE  120
RCFDKKIRYT VRKEVAHRMH RKNGQFASLK ENSATSSWDS TKSCLQGDGT PRPETVVRRC  180
QHCGVGENST PAMRRGPAGP RTLCNACGLM WANKGTLRDL SKGGRNLCLD QIEPETPVDI  240
KPSIIEGENF CGNQDNPGTP DDPSKVVTGE TGSPVNPDEE DLCGIAEDHT NSLAVGIINS  300
SCNLDEQETL VELVNICSET EIDIPANFSV DFFKRKSKQE LVGASNGE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.21e-52GATA family protein