PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028061955.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GATA | ||||||||
Protein Properties | Length: 357aa MW: 39033.1 Da PI: 4.5671 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 46.8 | 3.9e-15 | 209 | 245 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg+ + Tp +Rrgp g++tLCnaCGl+++ k++ XP_028061955.1 209 CQHCGVGEnsTPAMRRGPAGPRTLCNACGLMWANKET 245 *****99889***********************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 357 aa Download sequence |
MEAVNPQPLQ ALPYEDHLVF PTEDDGDDYD DGGDGDDGMD EAEDEHVTSV NASDHHHHYY 60 GGGGGVVVAS RTSELTLAFE GEVYVFPAVT PEKVQAVLLL LGERKIPTGV PTIDVPFNSN 120 NRGVDDNQKC SNISRRIASL VRFREKRKER CFDKKIRYTV RKEVAHRMHR KNGQFASLKE 180 NSATSSWDST KSCLQGDGTP RPETVVRRCQ HCGVGENSTP AMRRGPAGPR TLCNACGLMW 240 ANKETPVDIK PSIIEGENFC GNQDNPGTPD DPSKVVTGET GSPVNPDEED LCGIAEDHTN 300 SLAVGIINSS CNLDEQETLV ELVNICSETE IDIPANFSVD FFKRKSKQEL VGASNGE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21175.2 | 9e-64 | GATA family protein |