PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028061952.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GATA
Protein Properties Length: 362aa    MW: 39558.7 Da    PI: 4.5228
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028061952.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA47.62.3e-15209245135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg+ +  Tp +Rrgp g++tLCnaCGl+++ kg+
  XP_028061952.1 209 CQHCGVGEnsTPAMRRGPAGPRTLCNACGLMWANKGT 245
                     *****99889************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MEAVNPQPLQ ALPYEDHLVF PTEDDGDDYD DGGDGDDGMD EAEDEHVTSV NASDHHHHYY  60
GGGGGVVVAS RTSELTLAFE GEVYVFPAVT PEKVQAVLLL LGERKIPTGV PTIDVPFNSN  120
NRGVDDNQKC SNISRRIASL VRFREKRKER CFDKKIRYTV RKEVAHRMHR KNGQFASLKE  180
NSATSSWDST KSCLQGDGTP RPETVVRRCQ HCGVGENSTP AMRRGPAGPR TLCNACGLMW  240
ANKGTLRDLS KGGRNLCLDQ IEPETPVDIK PSIIEGENFC GNQDNPGTPD DPSKVVTGET  300
GSPVNPDEED LCGIAEDHTN SLAVGIINSS CNLDEQETLV ELVNICSETE IDIPANFSVY  360
NC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.21e-68GATA family protein