PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028061948.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GATA
Protein Properties Length: 265aa    MW: 29192.5 Da    PI: 6.3903
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028061948.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.22.2e-18210246135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cgt++  Tp++Rrgpdg++tLCnaCGl+++ kg 
  XP_028061948.1 210 CTHCGTSSksTPMMRRGPDGPRTLCNACGLFWANKGA 246
                     *********************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MYAHSQSLNV PNHFTTADQD PSPCAGGGGG ESAADNPHVS YETHSLNDGV GIDDVHIVPS  60
DVVYADGASD LPLQRTDCSN QLTLSFRGQV FVFDDVTTDK VQAVLLLLGA SELSSTMQGG  120
ELPYENQRES MEYPVRCSLP QRAASLSRFR QKRKERCFDK KIRYNVRQEV ALRMQRKKGQ  180
FTSAKKCEES ASYNTGEDSG QDDSPPETIC THCGTSSKST PMMRRGPDGP RTLCNACGLF  240
WANKGAMRDL SKKMHDFAPA PTEQW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.36e-72GATA family protein