PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028061947.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GATA | ||||||||
Protein Properties | Length: 281aa MW: 30963.3 Da PI: 6.233 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 57.1 | 2.4e-18 | 210 | 246 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cgt++ Tp++Rrgpdg++tLCnaCGl+++ kg XP_028061947.1 210 CTHCGTSSksTPMMRRGPDGPRTLCNACGLFWANKGA 246 *********************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 281 aa Download sequence |
MYAHSQSLNV PNHFTTADQD PSPCAGGGGG ESAADNPHVS YETHSLNDGV GIDDVHIVPS 60 DVVYADGASD LPLQRTDCSN QLTLSFRGQV FVFDDVTTDK VQAVLLLLGA SELSSTMQGG 120 ELPYENQRES MEYPVRCSLP QRAASLSRFR QKRKERCFDK KIRYNVRQEV ALRMQRKKGQ 180 FTSAKKCEES ASYNTGEDSG QDDSPPETIC THCGTSSKST PMMRRGPDGP RTLCNACGLF 240 WANKGAMRDL SKKMHDFAPA PTEQREDVAY NSDYGTPIHT H |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24470.3 | 3e-72 | GATA family protein |