PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028061878.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family AP2
Protein Properties Length: 508aa    MW: 55576.4 Da    PI: 6.4432
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028061878.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.46.5e-17166215155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  XP_028061878.1 166 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 215
                     78*******************......55************************997 PP

2AP2431.1e-13258308155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV+ +k  grW+A+   +     +k+++lg f+++ eAa+a+++a+ +++g
  XP_028061878.1 258 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEIEAARAYDKAAIQYNG 308
                     89********.7******5553..2.26**********99***********9987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 508 aa     Download sequence    
MLDLNLSVVH NENSMAITEK FPDGSGGQMD ESGTSNSSIV NVEVSSNAGD DDDSCSTRVP  60
GRDIFAFNFG IMKLGGECND NTTEEGKEDR MTQSEFVTRQ LFPVSGDPGL TVGQSLAPSP  120
GALLRPNLVD LSFGQASSGG LQEVRVLQPQ QQQVKKSRRG PRSRSSQYRG VTFYRRTGRW  180
ESHIWDCGKQ VYLGGFDTAH AAARAYDRAA IKFRGVDADI NFNLSDYEED LTQTKNLTKE  240
EFVHILRRQS TGFSRGSSKY RGVTLHKCGR WEARMGQFLG KKYIYLGLFD SEIEAARAYD  300
KAAIQYNGRE AVTNFEPSTY DGETISEVNG GGGDHNLDLN LGISTPSSGD GPKDNKNSGH  360
LQFHPYGIQD ARRSNMKNPS TTTIGNPTLE GLAMTSEHCP LWTGGVYPNF FPSYEERATE  420
KRIEVGSSQG PPNWVWQMHG RVTPTQMATF STAASSGFSS VSTTALSASI HPSNPPNPTA  480
LNLCFSSSAT ASGNPQYYYQ MRPLQPPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.31e-111AP2 family protein