PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028061793.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

ARR-B

Protein Properties

Length: 631aa MW: 70930.4 Da PI: 6.7893

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028061793.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	78.3	9.3e-25	239	292	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++Wt +LH++Fv+av+q+ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl XP_028061793.1 239 KARVVWTVDLHQKFVKAVNQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 292 68*****************.9*****************************8 PP
2	Myb_DNA-binding	39.8	1.1e-12	241	291	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r WT ++++++v+av+q G + +k+I m+ +t++++ s++qky+ XP_028061793.1 241 RVVWTVDLHQKFVKAVNQIGFDkvGPKKILDLMNvPWLTRENVASHLQKYR 291 678***********************************************7 PP
3	Response_reg	58.6	3.4e-20	83	167	26	109
EEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 26 vaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 v+++ ++eal+ll+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ Ga d+l Kp+ ++el++ XP_028061793.1 83 VTTCCLAREALDLLRERKdgFDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMRGVQHGACDYLLKPIRMKELRN 167 78888899****999999******************6644.8*********************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 631 aa Download sequence
MHQMVLETTV SLYVLMCSHA SAADDVQDGC IRRHMALLTW RCLLGWSPKG HRLLGWAILD 60 YISWWELGRA SNISIKISQP FFVTTCCLAR EALDLLRERK DGFDIVISDV NMPDMDGFKL 120 LEHVGLEMDL PVIMMSVDGE TSRVMRGVQH GACDYLLKPI RMKELRNIWQ HVFRKRIHEV 180 RDIEGHEGYE ETQMMRHGSD QSDDGQLFGG GDLTSGKKRK DAENRHDDRD CVDPSSVKKA 240 RVVWTVDLHQ KFVKAVNQIG FDKVGPKKIL DLMNVPWLTR ENVASHLQKY RLYLSRLQKE 300 NELKASFGGV KQSDSSSRDT AASLGLQNSI NRQQSDAASG IYGISSNKTL VQNVDPKIHE 360 GDLKGIVSLP MAEPKKGPVH DIPNLPKTSG SKMGLNHSFG SLEPDVKYTM YDSTVPKQYS 420 WSEVSEIQFK QEHKPRHQLG NGFNRLSLPG LQHHVQVDCL QPAPSVSPRP FNKESKKPAC 480 IEMKTSHANC RSPQIRQVAP IGSATNLCPV QSESHLASFH ASEPILSTAS SMKNNGLSQI 540 FTNDLEPNQR NLVLGRSVGF ASSDEDFLTC LLPGDRYTTN VGLEDNESFN HNCTELFAET 600 PAFLYDAQRF EYEYSSESVE YPVIDQGLFI V

Sequence ? help Back to Top

Protein Sequence Length: 631 aa Download sequence

MHQMVLETTV SLYVLMCSHA SAADDVQDGC IRRHMALLTW RCLLGWSPKG HRLLGWAILD  60
YISWWELGRA SNISIKISQP FFVTTCCLAR EALDLLRERK DGFDIVISDV NMPDMDGFKL  120
LEHVGLEMDL PVIMMSVDGE TSRVMRGVQH GACDYLLKPI RMKELRNIWQ HVFRKRIHEV  180
RDIEGHEGYE ETQMMRHGSD QSDDGQLFGG GDLTSGKKRK DAENRHDDRD CVDPSSVKKA  240
RVVWTVDLHQ KFVKAVNQIG FDKVGPKKIL DLMNVPWLTR ENVASHLQKY RLYLSRLQKE  300
NELKASFGGV KQSDSSSRDT AASLGLQNSI NRQQSDAASG IYGISSNKTL VQNVDPKIHE  360
GDLKGIVSLP MAEPKKGPVH DIPNLPKTSG SKMGLNHSFG SLEPDVKYTM YDSTVPKQYS  420
WSEVSEIQFK QEHKPRHQLG NGFNRLSLPG LQHHVQVDCL QPAPSVSPRP FNKESKKPAC  480
IEMKTSHANC RSPQIRQVAP IGSATNLCPV QSESHLASFH ASEPILSTAS SMKNNGLSQI  540
FTNDLEPNQR NLVLGRSVGF ASSDEDFLTC LLPGDRYTTN VGLEDNESFN HNCTELFAET  600
PAFLYDAQRF EYEYSSESVE YPVIDQGLFI V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	1e-102	ARR-B family protein