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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028061695.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | AP2 | ||||||||
Protein Properties | Length: 508aa MW: 56561.4 Da PI: 8.4391 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.4 | 6.5e-17 | 150 | 199 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_028061695.1 150 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 199 78*******************......55************************997 PP | |||||||
2 | AP2 | 43.8 | 6.4e-14 | 242 | 292 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g XP_028061695.1 242 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDKAAIKCNG 292 89********.7******5553..2.26**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 508 aa Download sequence |
MWDLNDSPDQ RIRDDVSEGC SSPGDDEKGK RVGSVSNSSS SAVVIEEASD DDDGGDRGGR 60 KRSCSKIFGF SVSESDLPVT RQFFPVEDFE MGTTSGGGGG GGSNFPRAHW VGVKFGQPEP 120 LGGGGGGIGK FLELTQPLRK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD CGKQVYLGGF 180 DTAHAAARAY DRAAIKFRGV EADINFSLED YEEDLKQMSN LTKEEFVHVL RRQSTGFPRG 240 SSKYRGVTLH KCGRWEARMG QFLGKKYVYL GLFDTEIEAA RAYDKAAIKC NGKEAVTNFD 300 PSIYEDELKS TESPRNAAPD HNLDLSLGSS TSKHKNSREL GNKIQNVDQS DQHRTTIPFE 360 ADWHNRAFRP QLNIQQEPYR INSYRREGYN ETQTMQLLSQ THIQSPSSLR SGQFVKESEN 420 SMLHMFSPSS NYQVQYPSSS SNGGQIGATT GGDHLSLSMS NNQQRLFINP PQLFATAAAS 480 SGFPQQITNR PQNWLHQKNG FHSLMRPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 1e-115 | AP2 family protein |