PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028061695.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family AP2
Protein Properties Length: 508aa    MW: 56561.4 Da    PI: 8.4391
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028061695.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.46.5e-17150199155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  XP_028061695.1 150 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 199
                     78*******************......55************************997 PP
2AP243.86.4e-14242292155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV+ +k  grW+A+   +     +k+++lg f+t+ eAa+a+++a+ k +g
  XP_028061695.1 242 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDKAAIKCNG 292
                     89********.7******5553..2.26**********99**********99776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 508 aa     Download sequence    
MWDLNDSPDQ RIRDDVSEGC SSPGDDEKGK RVGSVSNSSS SAVVIEEASD DDDGGDRGGR  60
KRSCSKIFGF SVSESDLPVT RQFFPVEDFE MGTTSGGGGG GGSNFPRAHW VGVKFGQPEP  120
LGGGGGGIGK FLELTQPLRK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD CGKQVYLGGF  180
DTAHAAARAY DRAAIKFRGV EADINFSLED YEEDLKQMSN LTKEEFVHVL RRQSTGFPRG  240
SSKYRGVTLH KCGRWEARMG QFLGKKYVYL GLFDTEIEAA RAYDKAAIKC NGKEAVTNFD  300
PSIYEDELKS TESPRNAAPD HNLDLSLGSS TSKHKNSREL GNKIQNVDQS DQHRTTIPFE  360
ADWHNRAFRP QLNIQQEPYR INSYRREGYN ETQTMQLLSQ THIQSPSSLR SGQFVKESEN  420
SMLHMFSPSS NYQVQYPSSS SNGGQIGATT GGDHLSLSMS NNQQRLFINP PQLFATAAAS  480
SGFPQQITNR PQNWLHQKNG FHSLMRPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36920.11e-115AP2 family protein