PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028061621.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 237aa MW: 27307.1 Da PI: 7.8303 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 39.3 | 1.5e-12 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+ eEd +l + + G +W+++++ g+ R++k+c++rw +yl XP_028061621.1 14 RGPWSIEEDHKLMNFILNNGIQCWRLVPKLAGLFRCGKSCRLRWINYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.1 | 3e-16 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+ E++ +++++ +G++ W++Ia++++ gRt++++k++w++ XP_028061621.1 67 RGALTAAEEDMIIQLHSHYGNR-WSKIASHFP-GRTDNEIKNHWNT 110 7889******************.*********.***********97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 237 aa Download sequence |
MGRQPCCDKI GLRRGPWSIE EDHKLMNFIL NNGIQCWRLV PKLAGLFRCG KSCRLRWINY 60 LRPDLKRGAL TAAEEDMIIQ LHSHYGNRWS KIASHFPGRT DNEIKNHWNT RIKKRLKLLG 120 LDPTTHKPIE QPEMFTTKEL DCGVPSSFEQ HQMFTTKDKV ILQSNSFWNQ ANNNLELDLH 180 DSLCSKGTSM AISATQPSNA SASVSEPVHE DFLQQWIDNP NSMLSWDGFN NLEEIFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G14340.1 | 2e-84 | MYB family protein |