PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028061134.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 344aa MW: 39481.1 Da PI: 10.0384

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028061134.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.7	3.7e-15	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd ll +vkq+G++ W++I+++m+ + R +k+c +rw +yl XP_028061134.1 4 RQRWRPEEDALLHAYVKQYGPREWNLISQRMNttLDRDAKSCLERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	34.8	3.9e-11	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ l +++ + +G++ Wk+Ia++++ gRt+k + +w + XP_028061134.1 59 KGSLTEEEQRLVIRLQANHGNK-WKKIAAEVP-GRTAKRLGKWWEVF 103 6788****************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MKERQRWRPE EDALLHAYVK QYGPREWNLI SQRMNTTLDR DAKSCLERWK NYLKPGIKKG 60 SLTEEEQRLV IRLQANHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE QKENNKVIDL 120 VEDGKYDLIL ETFAEKLVKE RPGPTFLMAT SNGGAPPNLL PPWLSNSNAP SNVRPPSPSV 180 TLSLSPATVP PSPAIPWLQP DRGPNNGAHV VGTLPPRGGE NMLISDLTEC CKDLEEGHRA 240 LAAHKKEAAW RLKRVELQLE SEKASRRREK TEEIESKVRA LKEEQKAALD RIEAEYREQL 300 AGLRRDAEAK EQKLAEQWAA KHLRLTKFLE QMGCWPRLAE HNGR

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MKERQRWRPE EDALLHAYVK QYGPREWNLI SQRMNTTLDR DAKSCLERWK NYLKPGIKKG  60
SLTEEEQRLV IRLQANHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE QKENNKVIDL  120
VEDGKYDLIL ETFAEKLVKE RPGPTFLMAT SNGGAPPNLL PPWLSNSNAP SNVRPPSPSV  180
TLSLSPATVP PSPAIPWLQP DRGPNNGAHV VGTLPPRGGE NMLISDLTEC CKDLEEGHRA  240
LAAHKKEAAW RLKRVELQLE SEKASRRREK TEEIESKVRA LKEEQKAALD RIEAEYREQL  300
AGLRRDAEAK EQKLAEQWAA KHLRLTKFLE QMGCWPRLAE HNGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-138	MYB family protein