PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028061091.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 301aa MW: 34432.4 Da PI: 6.5815 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 45.2 | 2.1e-14 | 22 | 69 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W+++Ed++l + + ++G g+W++++ g+ R +k+c++rw +yl XP_028061091.1 22 KGLWSPDEDQRLRNHILEHGHGCWSSVPINAGLQRNGKSCRLRWINYL 69 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 46.5 | 8.8e-15 | 75 | 120 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +T+ E++ ++ ++++lG++ W+ Ia+++ gRt++++k++w++yl XP_028061091.1 75 RGMFTASEEQTILTLHAMLGNK-WSQIAQHLY-GRTDNEIKNYWHSYL 120 789*******************.********9.************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 301 aa Download sequence |
MGCDKSTEKP KPKQKQKQKH KKGLWSPDED QRLRNHILEH GHGCWSSVPI NAGLQRNGKS 60 CRLRWINYLR PGLKRGMFTA SEEQTILTLH AMLGNKWSQI AQHLYGRTDN EIKNYWHSYL 120 KKKVAKMEQT EPQNNTKLMS PNTESSLSSH KSTPRNPSFE SFEHMEGSST NTNQSIPQIF 180 NFPREPACFQ NNLPKLLFAE WLSLDQFQGQ EFGSSGEPAI SNKDAALDHN PNFQDSFLNG 240 LLANEGSFGC EFRQELSNGS ADEMFQHPQF KSEDWFLESE LVDLITEDDL NMNNGCVYEG 300 C |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52260.1 | 4e-58 | MYB family protein |