PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028061088.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Dof

Protein Properties

Length: 292aa MW: 32064 Da PI: 7.0886

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028061088.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	117.5	5.1e-37	35	94	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++++lkcprCds ntkfCyynny+lsqPr+fCk+CrryWtkGG lr vPvGgg+rk k+s XP_028061088.1 35 NQQTLKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRCVPVGGGCRKTKRS 94 6899*****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MQDIHSIGGG GGRLFGGGGD RRLRPHHHHH HHHQNQQTLK CPRCDSLNTK FCYYNNYNLS 60 QPRHFCKSCR RYWTKGGVLR CVPVGGGCRK TKRSKPKSSS DAPPDRKSNS HSSSESSSLT 120 ASTTAATMTS TAAAAPEVAS ASPSTFPDSR FFNISQTTNP SFDPPLMDQS SDDGIFPEIG 180 SFANLMTSSN DHHQSLLGFN FNISDISAPA YRFHQQNHGT VLQNQKIHED NSGFLDQTAQ 240 IDLSGANNGG VEALDWEGGG DQNMFDLTGT VDQAYWSQQT QWTDNDQALY LP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	9	19	GGGGRLFGGGG
2	10	20	GGGGRLFGGGG
3	11	21	GGGGRLFGGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60850.1	4e-31	Dof family protein