PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028060940.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 261aa MW: 29837.2 Da PI: 4.7679 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 66.4 | 3.7e-21 | 64 | 117 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq++ Le+ Fe ++++ e++++LAkklgL+ rqV vWFqNrRa++k XP_028060940.1 64 KKRRLTPEQVNMLEKSFEAENKLEPEQKTQLAKKLGLQPRQVAVWFQNRRARWK 117 5668*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 131.8 | 2.7e-42 | 63 | 154 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl+ eqv++LE+sFe+e+kLepe+K++la++LglqprqvavWFqnrRAR+ktk lE+d+++Lk++y++l ++ +++ ke+++L++e+ XP_028060940.1 63 EKKRRLTPEQVNMLEKSFEAENKLEPEQKTQLAKKLGLQPRQVAVWFQNRRARWKTKLLERDFDHLKSSYESLLSDVDSICKENDKLKAEIV 154 69**************************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MDSSRVFFDP SYHTNMLFVG NGDPVFRGGR SVMNMEETLK RRPFFSSSEE LYDDDYYDEQ 60 LSEKKRRLTP EQVNMLEKSF EAENKLEPEQ KTQLAKKLGL QPRQVAVWFQ NRRARWKTKL 120 LERDFDHLKS SYESLLSDVD SICKENDKLK AEIVSLTEKL QTKEVAAGGA PKSEPLPADV 180 VPHISILQLN VKVEDRLSSG SGGSAVVEEE DGPQLVDSGD SYLPKDDIDR RNYFSPVFAA 240 AEQQQHHPHD DGEPLGWWAW S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 4e-85 | HD-ZIP family protein |