PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028060568.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 770aa MW: 86957.7 Da PI: 6.1218

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028060568.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	48.5	1.7e-15	584	627	5	48
RWP-RK 5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 is+ed++k F +++ dAA +Lgv+ ++LKr CR+y+I+ W Rk XP_028060568.1 584 ISFEDIQKRFGMKLDDAAESLGVSRSTLKRVCREYNISWWSPRK 627 89**************************************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 770 aa Download sequence
MSGTMAENHQ QFLWTKYPTD DNMFGDFPAH FKMYVKKNQL LCQRGYFNRG WVFSNQEDDC 60 CEPPPPPPAP FSLEIIDLEL DTSVAANRDL VEKIKSVIKW MVFSPGEFLV QFWKAIEIGG 120 RRLLTTRDQP FGVSTIEHAG LCSYRLVSLG YEFCVDVGAT DEDELGLLGR VFRHQQPEST 180 PNIGYYSCKE YPQRNQAIVN NISGALTLPV FERSGGQPCV GVLEIVTAAK GNYYLREIKN 240 WMRKDFTTLY KDEAFEAALV EVKEVLELVC RTHYLPLAQI WILCRLCHPI GIGGSFNVSC 300 REHLVSERDT CFHMDKDKFH FSHACSLHTL QKGQGVVGRA FASHNLVFCK DITQFNITEY 360 PLAHYARECS FTGCFAICLQ ESYTGDNVIV LEFFLPPSYT EGGGDPRFIL FLLVATMRHH 420 LKSFKVASGE ELGDALSVEV IDFSKDDKLD HFQIPQIARS PDGIENGLEV VCLGLSYQQW 480 LQVDAIDIGN NVFSNTEINI AAATSSWQKC ITHQIPQIAR SPDRIENGGE LASYQQLLQV 540 DAIDTGNNVF NSTEINKIAA ATSSQQKCIT HPSKRQCRKA GIPISFEDIQ KRFGMKLDDA 600 AESLGVSRST LKRVCREYNI SWWSPRKRTK DNGSLSKKIV QGAAEGQIRE SSQSPFSDPP 660 HKQDLAIAAL TKPYFMEAQD TSTVNIKAKY GEYFIKFQLP VLSGMVEFQQ EVTKRLNWMA 720 GTYNVKYQDD DNDWISVSCD EDLRYYICNS RSQGRNPVTF SLQPITSCPP

Sequence ? help Back to Top

Protein Sequence Length: 770 aa Download sequence

MSGTMAENHQ QFLWTKYPTD DNMFGDFPAH FKMYVKKNQL LCQRGYFNRG WVFSNQEDDC  60
CEPPPPPPAP FSLEIIDLEL DTSVAANRDL VEKIKSVIKW MVFSPGEFLV QFWKAIEIGG  120
RRLLTTRDQP FGVSTIEHAG LCSYRLVSLG YEFCVDVGAT DEDELGLLGR VFRHQQPEST  180
PNIGYYSCKE YPQRNQAIVN NISGALTLPV FERSGGQPCV GVLEIVTAAK GNYYLREIKN  240
WMRKDFTTLY KDEAFEAALV EVKEVLELVC RTHYLPLAQI WILCRLCHPI GIGGSFNVSC  300
REHLVSERDT CFHMDKDKFH FSHACSLHTL QKGQGVVGRA FASHNLVFCK DITQFNITEY  360
PLAHYARECS FTGCFAICLQ ESYTGDNVIV LEFFLPPSYT EGGGDPRFIL FLLVATMRHH  420
LKSFKVASGE ELGDALSVEV IDFSKDDKLD HFQIPQIARS PDGIENGLEV VCLGLSYQQW  480
LQVDAIDIGN NVFSNTEINI AAATSSWQKC ITHQIPQIAR SPDRIENGGE LASYQQLLQV  540
DAIDTGNNVF NSTEINKIAA ATSSQQKCIT HPSKRQCRKA GIPISFEDIQ KRFGMKLDDA  600
AESLGVSRST LKRVCREYNI SWWSPRKRTK DNGSLSKKIV QGAAEGQIRE SSQSPFSDPP  660
HKQDLAIAAL TKPYFMEAQD TSTVNIKAKY GEYFIKFQLP VLSGMVEFQQ EVTKRLNWMA  720
GTYNVKYQDD DNDWISVSCD EDLRYYICNS RSQGRNPVTF SLQPITSCPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	4e-78	Nin-like family protein