PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028060567.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 787aa MW: 89015.2 Da PI: 6.2109

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028060567.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	48.5	1.7e-15	601	644	5	48
RWP-RK 5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 is+ed++k F +++ dAA +Lgv+ ++LKr CR+y+I+ W Rk XP_028060567.1 601 ISFEDIQKRFGMKLDDAAESLGVSRSTLKRVCREYNISWWSPRK 644 89**************************************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 787 aa Download sequence
MSGTMAENHQ QFLWTKYPTD DNMFGDFPAH FKMYVKKNQL LCQRGYFNRG WVFSNQEDDC 60 CEPPPPPPAP FSLEIIDLEL DTSVAANRDL VEKIKSVIKW MVFSPGEFLV QFWKAIEIGG 120 RRLLTTRDQP FGVSTIEHAG LCSYRLVSLG YEFCVDVGAT DEDELGLLGR VFRHQQPEST 180 PNIGYYSCKE YPQRNQAIVN NISGALTLPV FERSGGQPCV GVLEIVTAAK GNYYLREIKN 240 WMRKDFTFVD LKYPETCKQL CYKPTLYKDE AFEAALVEVK EVLELVCRTH YLPLAQIWIL 300 CRLCHPIGIG GSFNVSCREH LVSERDTCFH MDKDKFHFSH ACSLHTLQKG QGVVGRAFAS 360 HNLVFCKDIT QFNITEYPLA HYARECSFTG CFAICLQESY TGDNVIVLEF FLPPSYTEGG 420 GDPRFILFLL VATMRHHLKS FKVASGEELG DALSVEVIDF SKDDKLDHFQ IPQIARSPDG 480 IENGLEVVCL GLSYQQWLQV DAIDIGNNVF SNTEINIAAA TSSWQKCITH QIPQIARSPD 540 RIENGGELAS YQQLLQVDAI DTGNNVFNST EINKIAAATS SQQKCITHPS KRQCRKAGIP 600 ISFEDIQKRF GMKLDDAAES LGVSRSTLKR VCREYNISWW SPRKRTKDNG SLSKKIVQGA 660 AEGQIRESSQ SPFSDPPHKQ DLAIAALTKP YFMEAQDTST VNIKAKYGEY FIKFQLPVLS 720 GMVEFQQEVT KRLNWMAGTY NVKYQDDDND WISVSCDEDL RYYICNSRSQ GRNPVTFSLQ 780 PITSCPP

Sequence ? help Back to Top

Protein Sequence Length: 787 aa Download sequence

MSGTMAENHQ QFLWTKYPTD DNMFGDFPAH FKMYVKKNQL LCQRGYFNRG WVFSNQEDDC  60
CEPPPPPPAP FSLEIIDLEL DTSVAANRDL VEKIKSVIKW MVFSPGEFLV QFWKAIEIGG  120
RRLLTTRDQP FGVSTIEHAG LCSYRLVSLG YEFCVDVGAT DEDELGLLGR VFRHQQPEST  180
PNIGYYSCKE YPQRNQAIVN NISGALTLPV FERSGGQPCV GVLEIVTAAK GNYYLREIKN  240
WMRKDFTFVD LKYPETCKQL CYKPTLYKDE AFEAALVEVK EVLELVCRTH YLPLAQIWIL  300
CRLCHPIGIG GSFNVSCREH LVSERDTCFH MDKDKFHFSH ACSLHTLQKG QGVVGRAFAS  360
HNLVFCKDIT QFNITEYPLA HYARECSFTG CFAICLQESY TGDNVIVLEF FLPPSYTEGG  420
GDPRFILFLL VATMRHHLKS FKVASGEELG DALSVEVIDF SKDDKLDHFQ IPQIARSPDG  480
IENGLEVVCL GLSYQQWLQV DAIDIGNNVF SNTEINIAAA TSSWQKCITH QIPQIARSPD  540
RIENGGELAS YQQLLQVDAI DTGNNVFNST EINKIAAATS SQQKCITHPS KRQCRKAGIP  600
ISFEDIQKRF GMKLDDAAES LGVSRSTLKR VCREYNISWW SPRKRTKDNG SLSKKIVQGA  660
AEGQIRESSQ SPFSDPPHKQ DLAIAALTKP YFMEAQDTST VNIKAKYGEY FIKFQLPVLS  720
GMVEFQQEVT KRLNWMAGTY NVKYQDDDND WISVSCDEDL RYYICNSRSQ GRNPVTFSLQ  780
PITSCPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	4e-80	Nin-like family protein