PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028060341.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 369aa    MW: 41310.2 Da    PI: 6.4207
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028060341.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.17.2e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEde+l ++++++G g+W+t+++  g+ R++k+c++rw +yl
   XP_028060341.1 14 KGLWSPEEDEKLFNYITRFGVGCWSTVPKLAGLQRCGKSCRLRWINYL 61
                     678*******************************************97 PP

2Myb_DNA-binding46.21.1e-1467110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg ++++E++l++ +++ lG++ W+ Ia+ ++ gRt++++k++w++
   XP_028060341.1  67 RGMFSEQEEDLILSLHEALGNR-WAQIAAQLP-GRTDNEVKNFWNS 110
                      788*******************.*********.***********97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    
MGGQSLCVKP KLRKGLWSPE EDEKLFNYIT RFGVGCWSTV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGMF SEQEEDLILS LHEALGNRWA QIAAQLPGRT DNEVKNFWNS CLKKKLMKQG  120
IDPNTHKPIN DAEVRDGKTC TEKSSPTSPK LRGLGIVSAS AEIDQAFHVN NSTSTYYDGG  180
LTKSSREPFG SKPIFDPLLL YEFQGSVDPI GYNSNLLVTQ YQQTLRPYDQ NHLEVSPNFG  240
FNSMPNLTNF DHGNMGETDF SDNSTSRMSS LLFNDAKESS SNSSIVSSHT CFQMKNVVEN  300
AAFAWGTDNK LGPVFQCELN NGIKSEELNQ SPWPERQLHT HNSDDFSSYP LMSLSEDPTG  360
ASVGVFQHI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26660.14e-76MYB family protein