PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028060341.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 369aa MW: 41310.2 Da PI: 6.4207 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.1 | 7.2e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++++++G g+W+t+++ g+ R++k+c++rw +yl XP_028060341.1 14 KGLWSPEEDEKLFNYITRFGVGCWSTVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 46.2 | 1.1e-14 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E++l++ +++ lG++ W+ Ia+ ++ gRt++++k++w++ XP_028060341.1 67 RGMFSEQEEDLILSLHEALGNR-WAQIAAQLP-GRTDNEVKNFWNS 110 788*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 369 aa Download sequence |
MGGQSLCVKP KLRKGLWSPE EDEKLFNYIT RFGVGCWSTV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGMF SEQEEDLILS LHEALGNRWA QIAAQLPGRT DNEVKNFWNS CLKKKLMKQG 120 IDPNTHKPIN DAEVRDGKTC TEKSSPTSPK LRGLGIVSAS AEIDQAFHVN NSTSTYYDGG 180 LTKSSREPFG SKPIFDPLLL YEFQGSVDPI GYNSNLLVTQ YQQTLRPYDQ NHLEVSPNFG 240 FNSMPNLTNF DHGNMGETDF SDNSTSRMSS LLFNDAKESS SNSSIVSSHT CFQMKNVVEN 300 AAFAWGTDNK LGPVFQCELN NGIKSEELNQ SPWPERQLHT HNSDDFSSYP LMSLSEDPTG 360 ASVGVFQHI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26660.1 | 4e-76 | MYB family protein |