PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028060129.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family TCP
Protein Properties Length: 330aa    MW: 37404.9 Da    PI: 9.3828
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028060129.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1401.9e-43952423132
             TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............ssssasec......eaess 78 
                      kkdrhski T++g+RdRR+Rls+++a +fF Lqd+LGfdk+skt+eWLl+++k+aikelt+              s+ssas+c      +    
  XP_028060129.1  95 SKKDRHSKIDTAQGPRDRRMRLSLKVAGEFFGLQDMLGFDKASKTVEWLLNKSKTAIKELTKGfphmkqtrnvginSASSASDCedvsgiD---- 185
                     69***********************************************************************999888889995444332.... PP

             TCP  79 sssas...nsssg......kaaksaakskksqksaasalnlakesrakarararertrekmri 132
                        a    +   +      k ++s++k+ ++ +++ ++  lakesr+karararertr k ++
  XP_028060129.1 186 --DAIavdA---NqqvrsnKGKPSKEKKMRPMRKS-AFDPLAKESREKARARARERTRVKRSK 242
                     ..3332221...12233323444444444444444.4899******************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MYPNNSNGNN TNPISYTHYF CDITPNYKQE DHPPSSPLFY LPSPYIPYDD NILHDLFLQQ  60
QPMTAVEGTA SEEVVMVDSI KNNRICQHMP RKRSSKKDRH SKIDTAQGPR DRRMRLSLKV  120
AGEFFGLQDM LGFDKASKTV EWLLNKSKTA IKELTKGFPH MKQTRNVGIN SASSASDCED  180
VSGIDDAIAV DANQQVRSNK GKPSKEKKMR PMRKSAFDPL AKESREKARA RARERTRVKR  240
SKLSSEAMNH DMMNRLGSSN TFENGDGKET GTQSHKMNQS LDVPPGIEDL SSSIIFNYDH  300
HNPGISQEHQ FTGFQVYGKP WEAYNNINLC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.12e-22TCP family protein