PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028059919.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 371aa MW: 39334.7 Da PI: 7.5354

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028059919.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	129.5	3.4e-40	59	161	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 ++k+ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+ + + s +ss+s+ s++ XP_028059919.1 59 PPKRASTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANYSsLNISLRSSGSSMSASshfrtsl 153 789*************************************************************9999977765555555555333332333223 PP TCP 89 .......k 89 + XP_028059919.1 154 fdpnlstA 161 32222220 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MIMEAQNGMR WPNFPFQLLE KKEEEEEKQS ISAAESGGET TTSRQQVVAD PTPPPKKPPP 60 KRASTKDRHT KVDGRGRRIR MPATCAARVF QLTRELGHKS DGETIEWLLQ QAEPAVIAAT 120 GTGTIPANYS SLNISLRSSG SSMSASSHFR TSLFDPNLST ASLRPQSNWE RSVEESQRRI 180 FFSGAGISPT AENSSNSSTL LNFHTSTLNS MLQAKQLELH ETKRPPLEQD HPGSYMLHSS 240 SGTIPGSYGA VSPPGSMWMM SNSSNQLLNG VGGGGGEPIW ALPSSMSASG LHFMNFAAPM 300 ALLPGQQSSL GGGGSGGGGS GTVVADRHLG LLAAINGFRP VVAAGGSDSQ VSGLNLHHGG 360 DDRHDTNSHH S

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MIMEAQNGMR WPNFPFQLLE KKEEEEEKQS ISAAESGGET TTSRQQVVAD PTPPPKKPPP  60
KRASTKDRHT KVDGRGRRIR MPATCAARVF QLTRELGHKS DGETIEWLLQ QAEPAVIAAT  120
GTGTIPANYS SLNISLRSSG SSMSASSHFR TSLFDPNLST ASLRPQSNWE RSVEESQRRI  180
FFSGAGISPT AENSSNSSTL LNFHTSTLNS MLQAKQLELH ETKRPPLEQD HPGSYMLHSS  240
SGTIPGSYGA VSPPGSMWMM SNSSNQLLNG VGGGGGEPIW ALPSSMSASG LHFMNFAAPM  300
ALLPGQQSSL GGGGSGGGGS GTVVADRHLG LLAAINGFRP VVAAGGSDSQ VSGLNLHHGG  360
DDRHDTNSHH S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	1e-49	TCP family protein