PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028059763.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 450aa MW: 51508.9 Da PI: 5.3981

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028059763.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.5	6.3e-18	196	242	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd ll++ v+++G + W+ Ia+t+ gR +kqc++rw+++l XP_028059763.1 196 KGQWTAEEDRLLIQMVEKYGVRKWSHIAQTLK-GRIGKQCRERWHNHL 242 799**************************9.***********97 PP
2	Myb_DNA-binding	50.3	5.4e-16	250	290	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT+eEd +l++a+ + ++ W+ Ia++++ gRt++++k++w+ XP_028059763.1 250 IWTEEEDRILIQAHLEVRNR-WAEIAKRLP-GRTENSIKNHWN 290 6*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence
MEFDTKYRED LTYQPILSNN YLKPEIEDGF CFESCSSKGL FFQELHHLHD QFCPNGSSVI 60 LELGVQTGCF DPFDPFTNGY SPNLDDFYES KPFAENGANG TNVAVMQNFQ GECDGGGNLN 120 YPKQTPINVT ASEQSCGPFN SQDIRPVNFV IPDEGSCIVA ENGYYKEVGK KKNSSASSAP 180 KTRKPCKRRN KPSSVKGQWT AEEDRLLIQM VEKYGVRKWS HIAQTLKGRI GKQCRERWHN 240 HLRPDIKKDI WTEEEDRILI QAHLEVRNRW AEIAKRLPGR TENSIKNHWN ATKRKQYSKR 300 RCRRLPKYPR QSSLLQDYIK SLNLDGKSEN NSTNIANSFN GVLNVNHPTT IKAPLIQPET 360 VEYFCCPSDH IVPSYDFDVE VPELDFDEKL FEESSSIDSL IDQMPCPPLV EDDGKSFDLE 420 EVPLCMASSF VECEVKKEMD LMEMINQVNL

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence

MEFDTKYRED LTYQPILSNN YLKPEIEDGF CFESCSSKGL FFQELHHLHD QFCPNGSSVI  60
LELGVQTGCF DPFDPFTNGY SPNLDDFYES KPFAENGANG TNVAVMQNFQ GECDGGGNLN  120
YPKQTPINVT ASEQSCGPFN SQDIRPVNFV IPDEGSCIVA ENGYYKEVGK KKNSSASSAP  180
KTRKPCKRRN KPSSVKGQWT AEEDRLLIQM VEKYGVRKWS HIAQTLKGRI GKQCRERWHN  240
HLRPDIKKDI WTEEEDRILI QAHLEVRNRW AEIAKRLPGR TENSIKNHWN ATKRKQYSKR  300
RCRRLPKYPR QSSLLQDYIK SLNLDGKSEN NSTNIANSFN GVLNVNHPTT IKAPLIQPET  360
VEYFCCPSDH IVPSYDFDVE VPELDFDEKL FEESSSIDSL IDQMPCPPLV EDDGKSFDLE  420
EVPLCMASSF VECEVKKEMD LMEMINQVNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	1e-85	MYB family protein