PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028059566.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

GRF

Protein Properties

Length: 605aa MW: 65219.7 Da PI: 7.8179

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028059566.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	74.3	1.4e-23	230	274	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr++++ +k+CErH++rgr+rsrk++e XP_028059566.1 230 DPEPGRCRRTDGKKWRCSRDAVAEQKYCERHINRGRHRSRKPVEG 274 79****************************************986 PP
2	QLQ	55.8	1.4e-19	160	194	1	35
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 ++F+++Q+ +L++Q+l+yKy++an+P+P++Ll+a+ XP_028059566.1 160 GPFSPSQWVELEHQALIYKYIMANVPIPSNLLLAL 194 59******************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 605 aa Download sequence
MVDFGAVGLE TLVGPDNGVC SSQVVPNSDA IKHNSSGSGF LKKQRSGSGE DNWRSSKVPR 60 TVDFDAPKTM LQQQGTPLLL RSNSLLSGDG GGQNQTMLSF SSPRSDVPFL NKNGGLAERT 120 TQNPAFPFYQ HTPYAYTRNA GYYSGGLNAG LHAPLLEARG PFSPSQWVEL EHQALIYKYI 180 MANVPIPSNL LLALGKPPHP YGLSGFSAGS YVPNSLGWGS FHLGFSGNTD PEPGRCRRTD 240 GKKWRCSRDA VAEQKYCERH INRGRHRSRK PVEGRSGQAV SGSTTTKVEP IACPTPASVM 300 SSNGATNNLG ITQRQFKGLQ PPVAGNPSAE VLLNRMQVPQ GPSVVPIVTN LKSKDSPFSI 360 PKQHIPIEES CHSEFGLLSS DFLLDPSQKS SCMNSQNYTS ILDFNDPESH DQHPLRHFID 420 DWPKDQSDRS TISWPEELKS DLTQLSMSIP MASSDFSSTS SSSPQEKLAL SPLRLSCEFD 480 PIQMGLAVNN DFSESTQKQT NWIPVSWGSS MGGPLGEVLN STPSTVGAFN DKSALNVTTR 540 VWNGSPQFGS SPTGVLQKAS FVSLSNSSSA SSPRADKKIK NENGSLGDDM PGSTFASSFS 600 IPSLQ

Sequence ? help Back to Top

Protein Sequence Length: 605 aa Download sequence

MVDFGAVGLE TLVGPDNGVC SSQVVPNSDA IKHNSSGSGF LKKQRSGSGE DNWRSSKVPR  60
TVDFDAPKTM LQQQGTPLLL RSNSLLSGDG GGQNQTMLSF SSPRSDVPFL NKNGGLAERT  120
TQNPAFPFYQ HTPYAYTRNA GYYSGGLNAG LHAPLLEARG PFSPSQWVEL EHQALIYKYI  180
MANVPIPSNL LLALGKPPHP YGLSGFSAGS YVPNSLGWGS FHLGFSGNTD PEPGRCRRTD  240
GKKWRCSRDA VAEQKYCERH INRGRHRSRK PVEGRSGQAV SGSTTTKVEP IACPTPASVM  300
SSNGATNNLG ITQRQFKGLQ PPVAGNPSAE VLLNRMQVPQ GPSVVPIVTN LKSKDSPFSI  360
PKQHIPIEES CHSEFGLLSS DFLLDPSQKS SCMNSQNYTS ILDFNDPESH DQHPLRHFID  420
DWPKDQSDRS TISWPEELKS DLTQLSMSIP MASSDFSSTS SSSPQEKLAL SPLRLSCEFD  480
PIQMGLAVNN DFSESTQKQT NWIPVSWGSS MGGPLGEVLN STPSTVGAFN DKSALNVTTR  540
VWNGSPQFGS SPTGVLQKAS FVSLSNSSSA SSPRADKKIK NENGSLGDDM PGSTFASSFS  600
IPSLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	1e-117	GRF family protein