PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028059565.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

GRF

Protein Properties

Length: 606aa MW: 65290.7 Da PI: 7.8179

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028059565.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	74.3	1.4e-23	231	275	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr++++ +k+CErH++rgr+rsrk++e XP_028059565.1 231 DPEPGRCRRTDGKKWRCSRDAVAEQKYCERHINRGRHRSRKPVEG 275 79****************************************986 PP
2	QLQ	55.8	1.4e-19	161	195	1	35
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 ++F+++Q+ +L++Q+l+yKy++an+P+P++Ll+a+ XP_028059565.1 161 GPFSPSQWVELEHQALIYKYIMANVPIPSNLLLAL 195 59******************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 606 aa Download sequence
MVDFGAVGLE TLVGPDNGVC SSQVVPNSDA IKHNSSGSGF LKKQRSGSGE DNWRSSKVPR 60 TVDFDAPKTM LQQQGTPLLL RSNSLLSGDG GGQNQTMLSF SSPRSDVPFL NKNGGLAERT 120 TQNPAFPFYQ HTPYAYTRNA AGYYSGGLNA GLHAPLLEAR GPFSPSQWVE LEHQALIYKY 180 IMANVPIPSN LLLALGKPPH PYGLSGFSAG SYVPNSLGWG SFHLGFSGNT DPEPGRCRRT 240 DGKKWRCSRD AVAEQKYCER HINRGRHRSR KPVEGRSGQA VSGSTTTKVE PIACPTPASV 300 MSSNGATNNL GITQRQFKGL QPPVAGNPSA EVLLNRMQVP QGPSVVPIVT NLKSKDSPFS 360 IPKQHIPIEE SCHSEFGLLS SDFLLDPSQK SSCMNSQNYT SILDFNDPES HDQHPLRHFI 420 DDWPKDQSDR STISWPEELK SDLTQLSMSI PMASSDFSST SSSSPQEKLA LSPLRLSCEF 480 DPIQMGLAVN NDFSESTQKQ TNWIPVSWGS SMGGPLGEVL NSTPSTVGAF NDKSALNVTT 540 RVWNGSPQFG SSPTGVLQKA SFVSLSNSSS ASSPRADKKI KNENGSLGDD MPGSTFASSF 600 SIPSLQ

Sequence ? help Back to Top

Protein Sequence Length: 606 aa Download sequence

MVDFGAVGLE TLVGPDNGVC SSQVVPNSDA IKHNSSGSGF LKKQRSGSGE DNWRSSKVPR  60
TVDFDAPKTM LQQQGTPLLL RSNSLLSGDG GGQNQTMLSF SSPRSDVPFL NKNGGLAERT  120
TQNPAFPFYQ HTPYAYTRNA AGYYSGGLNA GLHAPLLEAR GPFSPSQWVE LEHQALIYKY  180
IMANVPIPSN LLLALGKPPH PYGLSGFSAG SYVPNSLGWG SFHLGFSGNT DPEPGRCRRT  240
DGKKWRCSRD AVAEQKYCER HINRGRHRSR KPVEGRSGQA VSGSTTTKVE PIACPTPASV  300
MSSNGATNNL GITQRQFKGL QPPVAGNPSA EVLLNRMQVP QGPSVVPIVT NLKSKDSPFS  360
IPKQHIPIEE SCHSEFGLLS SDFLLDPSQK SSCMNSQNYT SILDFNDPES HDQHPLRHFI  420
DDWPKDQSDR STISWPEELK SDLTQLSMSI PMASSDFSST SSSSPQEKLA LSPLRLSCEF  480
DPIQMGLAVN NDFSESTQKQ TNWIPVSWGS SMGGPLGEVL NSTPSTVGAF NDKSALNVTT  540
RVWNGSPQFG SSPTGVLQKA SFVSLSNSSS ASSPRADKKI KNENGSLGDD MPGSTFASSF  600
SIPSLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	1e-115	GRF family protein