PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028059156.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 392aa MW: 43889.1 Da PI: 9.5362

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028059156.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	95.4	1.2e-29	52	173	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.........eaesssssasnsss 87 g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+LG+ ++sk ++WLl + k++i+el+ ++ ++ c s ++ XP_028059156.1 52 FGGKDRHSKVSTIRGLRDRRIRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLDATKHEIDELPPLQIPPG--CftqfhqptlV-----SHQE---L 136 689*************************************************************77777..33233222221.....2222...1 PP TCP 88 g...................................k 89 + + XP_028059156.1 137 NnapqssfssffssiptymkdggtqsllpnkegikiN 173 1111222335555555666655555555544444441 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MMREDDHKLR GKDFQAKVEG DTSNSKVTKA PSSSRQWSAF KNPRIVRVSR AFGGKDRHSK 60 VSTIRGLRDR RIRLSVPTAI QLYDLQDRLG LNQPSKVVDW LLDATKHEID ELPPLQIPPG 120 CFTQFHQPTL VSHQELNNAP QSSFSSFFSS IPTYMKDGGT QSLLPNKEGI KINYNVGDNQ 180 SKTWDLDDTA MRAKLKEVER EANIVEKAKW MRTNEHQNHQ DGSSSAGYNA QVSAQNFFPI 240 ASNSSFPSLL NNAMPMPYNY YQWEPSNLSL SQFGSHGLLP QTEGANTGHL MPLPSSLALP 300 SRSQLFLYPP ASTPSIFPSY PPYITLGEND TRQLPTNHFQ LWSSNSQQAL PNPLMSSLHS 360 FTSPMSSTSK VLHLQSQNDD QRQPNKGGNT GF

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MMREDDHKLR GKDFQAKVEG DTSNSKVTKA PSSSRQWSAF KNPRIVRVSR AFGGKDRHSK  60
VSTIRGLRDR RIRLSVPTAI QLYDLQDRLG LNQPSKVVDW LLDATKHEID ELPPLQIPPG  120
CFTQFHQPTL VSHQELNNAP QSSFSSFFSS IPTYMKDGGT QSLLPNKEGI KINYNVGDNQ  180
SKTWDLDDTA MRAKLKEVER EANIVEKAKW MRTNEHQNHQ DGSSSAGYNA QVSAQNFFPI  240
ASNSSFPSLL NNAMPMPYNY YQWEPSNLSL SQFGSHGLLP QTEGANTGHL MPLPSSLALP  300
SRSQLFLYPP ASTPSIFPSY PPYITLGEND TRQLPTNHFQ LWSSNSQQAL PNPLMSSLHS  360
FTSPMSSTSK VLHLQSQNDD QRQPNKGGNT GF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	7e-50	TCP family protein