PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028059000.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GATA | ||||||||
Protein Properties | Length: 135aa MW: 15177.9 Da PI: 10.6849 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 60 | 2.9e-19 | 20 | 54 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 Cs C+ttkTplWR gp g+k+LCnaCG++y k+++ XP_028059000.1 20 CSDCHTTKTPLWRVGPAGPKSLCNACGIKYNKRRR 54 *******************************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence |
MDLKEKEAKG PGEMMIKKSC SDCHTTKTPL WRVGPAGPKS LCNACGIKYN KRRRALLGLD 60 RGRIEKGKKK RKKNRGGGNC RVGESLKLRL MALETDMVLQ RSEKQRNKLG EEERAAILLM 120 ALSCGSLYAF REEKP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 51 | 73 | KRRRALLGLDRGRIEKGKKKRKK |
2 | 52 | 74 | KRRRALLGLDRGRIEKGKKKRKK |
3 | 69 | 73 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49300.1 | 8e-27 | GATA family protein |