PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028058993.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | C2H2 | ||||||||
Protein Properties | Length: 192aa MW: 20556 Da PI: 7.4491 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.3 | 0.00025 | 59 | 81 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg+ F ++ L H++ H XP_028058993.1 59 FECQYCGRLFGNSQALGGHQNAH 81 89*****************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MAESSIPSNL ASEDISPDGA SIHREASAFR LFGFELTNHH QGNDEVAERT EFHGENKRFE 60 CQYCGRLFGN SQALGGHQNA HKRERKRMKL AQFHDNHRHF MASVAAAPLL SSHAMISSST 120 AAARFAVVPP PPPAFLPSLP SNLGTPIYIG QPLHVGGLSG PAAAVSYGSH LSCKSTSGDL 180 DLNLHLNLPP SG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06650.1 | 3e-14 | C2H2 family protein |