PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028058934.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 285aa MW: 31342.9 Da PI: 7.7894

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028058934.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.6	1.8e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd l+++ + +G+g +W + +++ g++R++k+c++rw++yl XP_028058934.1 14 KGPWSPEEDATLKNYLESHGTGgNWISLPQKAGLRRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	49.7	8.2e-16	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd ++ + ++lG++ W+ Ia++++ gRt++++k++w++ XP_028058934.1 69 GGFTEEEDNIICTLYTKLGSR-WSVIASHLQ-GRTDNDVKNHWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MGRAPCCDKT KVKKGPWSPE EDATLKNYLE SHGTGGNWIS LPQKAGLRRC GKSCRLRWLN 60 YLRPDIKHGG FTEEEDNIIC TLYTKLGSRW SVIASHLQGR TDNDVKNHWN TKLKKKLLAA 120 AAKTNNSIPL INNNNNPSDF YGSSTPSMES YNAPPSFPSL FNQNSPPIFI NYGLNINAQN 180 LIHHYPLSEL GEACEFNASA KKSNISGLSS SFAMESNHEG WSGGDVGFSM DMGSTGCPQD 240 VVNGVWSIQD TVGEFGNSYP SLVSSFYVDT KPQGGLPYQS VTNQY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65790.1	4e-67	MYB family protein