PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028058714.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Trihelix

Protein Properties

Length: 466aa MW: 50990.2 Da PI: 7.7291

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028058714.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	59	1.2e-18	84	170	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +L++a++e+ ++l+rg+l++ +Weev++ + + ++ ++s +qCk+k +nl+kryk ++++++++ s s++p+f+++e XP_028058714.1 84 EWSDTAIACLLDAYTEKFTQLNRGNLRGRDWEEVAAIVseSCEKQTKSVEQCKNKVDNLKKRYKLERHRMNNG-GVSASHWPWFNNME 170 5***********************************666678899******************9998.566679****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MASCDDDFSL LADDNAPPSN PSPLHHHFSD ESDPNKPRAN DASNDDNKRK DREELSDGGT 60 PYNSRKKSKL SFSAGGDYRK DREEWSDTAI ACLLDAYTEK FTQLNRGNLR GRDWEEVAAI 120 VSESCEKQTK SVEQCKNKVD NLKKRYKLER HRMNNGGVSA SHWPWFNNME LIVGNSLHSK 180 AVSEDEKAVS GSSNSLRQSK RYGISTPSPS GQMNNLKSSK SLTNPRWRRV VFKISGAALA 240 GTGPHNIDPK VAMLIAREVS TACRLGVEVA IVVGGRNFFC GDTWVTSTGL DRCTAYQIGM 300 MATAMNSILL QSALEKMGIQ TRVQTAFAMP EVAEPYNRQR AIRHLEKARV VIFGGIGAGT 360 GNPLFSTDTA AALRASEIHA DAVLKGTNVD GVYLCDSRNN NVVSEHISFR ELASRGASPM 420 DTMAVTFCEE NGIPVVIFNL HEPGNISRAL CGEQVGTLID QTGRVS

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MASCDDDFSL LADDNAPPSN PSPLHHHFSD ESDPNKPRAN DASNDDNKRK DREELSDGGT  60
PYNSRKKSKL SFSAGGDYRK DREEWSDTAI ACLLDAYTEK FTQLNRGNLR GRDWEEVAAI  120
VSESCEKQTK SVEQCKNKVD NLKKRYKLER HRMNNGGVSA SHWPWFNNME LIVGNSLHSK  180
AVSEDEKAVS GSSNSLRQSK RYGISTPSPS GQMNNLKSSK SLTNPRWRRV VFKISGAALA  240
GTGPHNIDPK VAMLIAREVS TACRLGVEVA IVVGGRNFFC GDTWVTSTGL DRCTAYQIGM  300
MATAMNSILL QSALEKMGIQ TRVQTAFAMP EVAEPYNRQR AIRHLEKARV VIFGGIGAGT  360
GNPLFSTDTA AALRASEIHA DAVLKGTNVD GVYLCDSRNN NVVSEHISFR ELASRGASPM  420
DTMAVTFCEE NGIPVVIFNL HEPGNISRAL CGEQVGTLID QTGRVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	0.0	Trihelix family protein