PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028058630.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | NF-YA | ||||||||
Protein Properties | Length: 256aa MW: 27850.2 Da PI: 6.8352 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 45 | 3.6e-14 | 134 | 158 | 34 | 58 |
CBFB_NFYA 34 srkpylheSRhkhAlrRpRgsgGrF 58 + +pylheSRh+hA+rR+Rg+gGrF XP_028058630.1 134 GAQPYLHESRHQHAMRRARGCGGRF 158 679*********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MPTNSENEDR QSENGAHVIP PSTVYSQPWW RVTGTNGMPS PVEHINGSAT GRAMSQANGD 60 ASNKEAHTIN AQQSGLNGHN VQEQQHLKHV PSSTPPAMGE HLEPNSQMEL VGHSIVLTSY 120 PYPDPHYGGI MAYGAQPYLH ESRHQHAMRR ARGCGGRFLN SKKLDSNATN PSANLSGSDH 180 LPLNSNRNSG HREKELPMYQ DMHGAHKSSN GNNINGHGLS MHHYSQSTDS DGGDWFDQEE 240 GSVLVSQAPR GPTTTK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72830.3 | 4e-14 | NF-YA family protein |