PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028058629.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | NF-YA | ||||||||
Protein Properties | Length: 311aa MW: 34425.1 Da PI: 8.0658 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 104.2 | 1.2e-32 | 157 | 213 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq Rakle ekk+ +k+rkpylheSRh+hA+rR+Rg+gGrF XP_028058629.1 157 EEPVYVNAKQYHGILRRRQIRAKLELEKKV-IKARKPYLHESRHQHAMRRARGCGGRF 213 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 311 aa Download sequence |
MPTNSENEDR QSENGAHVIP PSTVYSQPWW RVTGTNGMPS PVEHINGSAT GRAMSQANGD 60 ASNKEAHTIN AQQSGLNGHN VQEQQHLKHV PSSTPPAMGE HLEPNSQMEL VGHSIVLTSY 120 PYPDPHYGGI MAYGAQVHPH LLGIHQTRMP LPLEMEEEPV YVNAKQYHGI LRRRQIRAKL 180 ELEKKVIKAR KPYLHESRHQ HAMRRARGCG GRFLNSKKLD SNATNPSANL SGSDHLPLNS 240 NRNSGHREKE LPMYQDMHGA HKSSNGNNIN GHGLSMHHYS QSTDSDGGDW FDQEEGSVLV 300 SQAPRGPTTT K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12840.1 | 3e-39 | NF-YA family protein |