PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028058628.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YA
Protein Properties Length: 315aa    MW: 34840.6 Da    PI: 8.0658
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028058628.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA104.11.2e-32161217158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQy++Il+RRq Rakle ekk+ +k+rkpylheSRh+hA+rR+Rg+gGrF
  XP_028058628.1 161 EEPVYVNAKQYHGILRRRQIRAKLELEKKV-IKARKPYLHESRHQHAMRRARGCGGRF 217
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MPTNSENEDR QSENGAHVIP PSTVYSQPWW RVTGTNGMPS PVEHINGSAT GRAMSQANGD  60
ASNKEAHTIN AQQSGLNGHN VQEQQHLKHV PSSTPPAMGE HLEPNSQMEL VGHSIVLTSY  120
PYPDPHYGGI MAYGAQVGMQ VHPHLLGIHQ TRMPLPLEME EEPVYVNAKQ YHGILRRRQI  180
RAKLELEKKV IKARKPYLHE SRHQHAMRRA RGCGGRFLNS KKLDSNATNP SANLSGSDHL  240
PLNSNRNSGH REKELPMYQD MHGAHKSSNG NNINGHGLSM HHYSQSTDSD GGDWFDQEEG  300
SVLVSQAPRG PTTTK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.11e-39NF-YA family protein