PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028058470.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | Trihelix | ||||||||
Protein Properties | Length: 707aa MW: 78691.4 Da PI: 8.7279 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 70.7 | 2.6e-22 | 613 | 693 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ ev++Li++r e+++r++ k++++lWee+s+++ + g++rsp qCk+ w +l ++y++ik ek++ +++pyf++++ XP_028058470.1 613 KWKPGEVMKLINMRGELHSRFQVVKQRMALWEEISANLLADGINRSPGQCKSLWTSLVQKYEEIKGDEKSK-----KNWPYFEDMN 693 7********************************************************************95.....79******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 707 aa Download sequence |
MELIKKRLKD FGIFLPSRLK IFKTRRRFSA GPFEIEPIRV THSIPDCCGL VLRCADGTML 60 HTGDWKIDES PLDGKGFDRE ALEELSKEGV TLMMSDSTNI LSPGRTLSET VVADALLRRI 120 SAAKGRVITT QFASNIHRLG SVKAAADLTG RKLVFVGMAL RTYLDAAWKD GKAPIDPSTL 180 VKVEDIDAYA PKDLLIVTTG SQAEPRAALN LASYGSSHSL KLSKEDIILY SAKVIPGNEI 240 RVMKMLNRIS EIGSTIVMGK NEQLHTSGHG YRGELEEVLK IVKPQHFLPI HGELLFLREH 300 ELLGKSTGIR HTTVIKNGEM LGVSHLRNRR VLSNGFISLG KENLQLMYND GDKAFGTSTE 360 LCIDERLRIA SDGIIVVSME ILRPQDADGS VEKTLKGRIR ITTRCLWLDK GKLLDALHKA 420 AHASLSSCPI NCPLAHMERI VSEVLRKMVR KYSSKRPEVI AIAIENPAAV LSDELNARLS 480 GKSHVGFGIS ALRKVVDGHP KKRRTTDIQE EEGKTQQELE GHDIEDDRLL SEEATTSGSE 540 SAEKFSLNSD GSDDFWKSFI ASSPIEQSVK DSNGSVPQEE HREKLKIEET KVDDMVEIPK 600 CQSKSSKPGK RNKWKPGEVM KLINMRGELH SRFQVVKQRM ALWEEISANL LADGINRSPG 660 QCKSLWTSLV QKYEEIKGDE KSKKNWPYFE DMNKILSDLE ATAAATK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63420.1 | 0.0 | Trihelix family protein |