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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028058376.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | AP2 | ||||||||
Protein Properties | Length: 543aa MW: 59749.9 Da PI: 6.4177 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 45.5 | 1.9e-14 | 255 | 314 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +++Aa+a++ a++k++g XP_028058376.1 255 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqaRKgRQVYLGGYDKEDKAARAYDLAALKYWG 314 57*******************666664478446**********99*************98 PP | |||||||
2 | AP2 | 50.1 | 7.1e-16 | 357 | 408 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g XP_028058376.1 357 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 408 57****************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 543 aa Download sequence |
MARETSNWLS FSLSPMEMLS SSSQSQMLQS TMKLVPFDAP STEDSHHYYF DNFYANGWEN 60 TKAECLYDDG ENQVKQGQSI ADSSIFRSFV DSQIQQNTVP KLEDFLGGES SSLIGYSDSQ 120 TETQEDSSSL THIYGQNGST AYFNDHHQDL KPIQAAVGVG GFQAFSANSG SEEVVDDSAF 180 VGRAQLTCVN FGGRHHQSIE SGGGNQLGFS QCPTVGAGAL SLGVNSHSSS EKAIVSVDSS 240 GTCKKITDTF GQRTSIYRGV TRHRWTGRYE AHLWDNSCRR EGQARKGRQV YLGGYDKEDK 300 AARAYDLAAL KYWGPTATTN FPVSSYTTEL DEMKHATKQE FIASLRRKSS GFSRGASIYR 360 GVTRHHQQGR WQARIGRVAG NKDLYLGTFA TEEEAAEAYD IAAIKFRGLN AVTNFEMNRY 420 DVEAIMKSAL PIGGAAKRLK LSLEAEQKPY VNHDQQPQCS NNSSTSINFS TIQPLPAIPC 480 GGILPFDTTA RYHHNLFNIH SDNDRGTCTS DNPPGSAAAS MVTPMTFLPP PPAEFFIWPH 540 QSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10510.1 | 1e-167 | AP2 family protein |