PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028058294.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 349aa    MW: 39003.3 Da    PI: 7.1077
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028058294.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.61.2e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg W++eEde+l++++  +G g+W++++r  g+ R++k+c++rw +yl
   XP_028058294.1 14 RGLWSPEEDEKLINYISTYGHGCWSSVPRLAGLQRCGKSCRLRWINYL 61
                     788*******************************************97 PP

2Myb_DNA-binding48.52.1e-1567109145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      rg+++++E  l+++++  lG++ W+ Ia++++ gRt++++k++w+
   XP_028058294.1  67 RGSFSPQEAALIIELHSILGNR-WAQIAKHLP-GRTDNEVKNFWN 109
                      899*******************.*********.***********8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MAHHTCCNKQ KVKRGLWSPE EDEKLINYIS TYGHGCWSSV PRLAGLQRCG KSCRLRWINY  60
LRPDLKRGSF SPQEAALIIE LHSILGNRWA QIAKHLPGRT DNEVKNFWNS SIKKKLISHQ  120
YLATYPNLPP NPNPTGPFDG FFSVNNANPN LIPSPQDHLY IPTQNSVLQG FDHGHEMKVL  180
DQINFDPNLV PLQPPNSIPI LLDLPSYDSS SWPLNYQTPH IDHQNVLKEE DCMFINPKMT  240
TIPPSYDDPM VMPIMPKVYD MINCAMPSSS ASHKVDQITS LSCFPSGVPN SRDPNVTTNQ  300
MEYINAIMSS LPSSSLSSSS SSSSPSSSLS PLPCSQFVMN PNLATSWDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13890.23e-80MYB family protein