PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028057725.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 309aa MW: 34947.8 Da PI: 8.7342 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 21.5 | 5.5e-07 | 28 | 73 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 +WT+ E +l+ +a +++ ++ +W +a++++ g+t +++ ++ XP_028057725.1 28 KWTPAENKLFENALALFDKDtpdRWCNVAAMIP-GKTVSDVIKQYRE 73 8********************************.*******999986 PP | |||||||
2 | Myb_DNA-binding | 47.2 | 5.1e-15 | 136 | 180 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++ + k++G+g+W+ I+r + ++Rt+ q+ s+ qky XP_028057725.1 136 PWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKY 180 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 309 aa Download sequence |
MNRGMEILSP SSYVRNSNWL FEESNGTKWT PAENKLFENA LALFDKDTPD RWCNVAAMIP 60 GKTVSDVIKQ YRELEEDVSD IEAGLIPIPG YQTSSFTFEW ENSNQTYDGF KQFYSPSGKR 120 SSSTRPCDQE RKKGVPWTEE EHRQFLMGLK KYGKGDWRNI SRNFVTTRTP TQVASHAQKY 180 FIRQLSGGKD KRRSSIHDIT TFNVTDTKSP SPDDKRSPPS SDHSATVAQP PQHSNMNGIA 240 RALYSWDPSS QGTVMAFNMP NSSLLMATPC GTSSYGLELQ EQNLQKGTLN RTRVGAYNMG 300 FQMHSSQHQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38090.1 | 1e-114 | MYB family protein |