PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028057624.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GATA | ||||||||
Protein Properties | Length: 248aa MW: 26912.4 Da PI: 10.3352 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 55.8 | 6.4e-18 | 168 | 202 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 Cs+C + kTp+WR gp g ktLCnaCG++y++ +l XP_028057624.1 168 CSHCLVQKTPQWRAGPLGAKTLCNACGVRYKSGRL 202 *******************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MATASVLKTS TFSVTDDFRS ELSVPADDLA NLEWLSHFVE DSFSEYSLAG KLPDKTTGNR 60 SEPLEIAVLA KSCFTTPVQT KARSKRLRTG SRVWSLGSPS LTETTSSSSS SSSTLSSSPP 120 NPWLIFTTLS QTADSLLRPP LPAAKKPKRK RQEIPGGGGG GSQQPRRCSH CLVQKTPQWR 180 AGPLGAKTLC NACGVRYKSG RLLPEYRPAC SPTFSSEVHS NNHRKVLEMR RKKEVEDGGG 240 FAPPVQSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G51080.1 | 9e-59 | GATA family protein |