PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028057599.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Trihelix

Protein Properties

Length: 341aa MW: 37662.8 Da PI: 6.3847

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028057599.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	85	9.2e-27	30	121	1	82
trihelix 1 rWtkqevlaLiearremeerlrrgk............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyf 82 rW++qe+l+Li+++r e+r+rrg+ + + +W++vs++++++g++r+p+qC+++w+nl+++ykkike+e++ t e++ f XP_028057599.1 30 RWSRQEILVLIQGKRVAESRVRRGRaagglgqgqglvQVESKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDYKKIKEWESQITREDT--TESF 121 8********************98888999999999*******************************************986665..2223 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MNVANGGEVV GQAAEGGGGE EGNRAARLPR WSRQEILVLI QGKRVAESRV RRGRAAGGLG 60 QGQGLVQVES KWASVSSYCK RHGVNRGPVQ CRKRWSNLAG DYKKIKEWES QITREDTTES 120 FWVMRNDLRR ERKLPGFFDR EVYDILDNGT SPSSSVTPTP LLFPLAPPSQ PQPQDEDDHL 180 NNNQQDDEAV FDSGRNGLFS DFAQSAQEEA AGSPEKEFTK TLPAPGPVPI PIPISEKQYQ 240 PFSQGATHGT QQTSNPEVGA TTSHEGRKRR RFGADGDEET NTLQCQLIEV LEKNGKMLCA 300 QLEAQNTNFQ LDREQRKDHT GSLVTVLNKL ADALGRIADK L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	267	271	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	6e-81	Trihelix family protein