PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028057408.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 229aa MW: 25326.5 Da PI: 8.7751 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61.6 | 1.2e-19 | 64 | 118 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq + Lee F++n++++ +++e LA++l+L+ rqV vWFqNrRa+ k XP_028057408.1 64 RKKLRLTKEQSRLLEESFRQNHTLNPKQKEALAMQLQLKARQVEVWFQNRRARSK 118 78889************************************************98 PP | |||||||
2 | HD-ZIP_I/II | 115.1 | 4.2e-37 | 64 | 152 | 1 | 89 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rl+keq++lLEesF+++++L+p++K++la +L+l++rqv+vWFqnrRAR k+kq+E+++e+L+r++ +l+e+n+rL+keveeLr+ XP_028057408.1 64 RKKLRLTKEQSRLLEESFRQNHTLNPKQKEALAMQLQLKARQVEVWFQNRRARSKLKQTEMECEYLRRWFGSLTEQNRRLQKEVEELRA 152 69*************************************************************************************94 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MPGFASSHSL PSSEGVGGGG GMMRDLDINQ LPPSGRGEEE WTTASMELDE DDTNTGGGDG 60 GPPRKKLRLT KEQSRLLEES FRQNHTLNPK QKEALAMQLQ LKARQVEVWF QNRRARSKLK 120 QTEMECEYLR RWFGSLTEQN RRLQKEVEEL RAMKVGPPTV ISPHSCEPLP ASTLTMCPRC 180 ERVSSSSSAA TTTQDKGPTT RATNNPTTLS LSSSKVQPII HPRHPSAAC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 113 | 121 | RRARSKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01430.1 | 3e-67 | HD-ZIP family protein |