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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028056653.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | AP2 | ||||||||
Protein Properties | Length: 367aa MW: 41583.8 Da PI: 6.1401 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.3 | 5.9e-16 | 45 | 104 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n k+ ++++lg ++ +e Aa a++ a++k++g XP_028056653.1 45 SIYRGVTRHRWTGRYEAHLWDkNCWNEsqnKKgRQVYLGAYDDEEAAAHAYDLAALKYWG 104 57*******************999955656446*************************98 PP | |||||||
2 | AP2 | 52.8 | 9.8e-17 | 147 | 199 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g+ XP_028056653.1 147 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAAIAYDMAAIEYRGH 199 89****99**********99966...3.6**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 367 aa Download sequence |
MELSQQNTKN NAKCTSNTKT NTSSAMKVKR TRKTIPRDSP PQRSSIYRGV TRHRWTGRYE 60 AHLWDKNCWN ESQNKKGRQV YLGAYDDEEA AAHAYDLAAL KYWGPETILN FPLPTYQKQL 120 IEMEGISREE FIGSLRRKSS GFSRGVSKYR GVARHHHNGR WEARIGRVFG NKYLYLGTYA 180 TQEEAAIAYD MAAIEYRGHN AVTNFDLSGY ITWLRPKNNN TNQPKVSNVE TNLTTTHTTN 240 YELGSNFQHE QTTTAITCSS SDVAPTQSRP ATAAASALGL LLQSSKFKEM MEMTSATDEY 300 YCPSTPQEEE EEESSDPPPQ SQCSFPSDIQ TYFDSQSHED FGVYGDDGHD VIFGELELEL 360 NSFIFDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G16060.1 | 2e-92 | AP2 family protein |