PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028056597.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GATA
Protein Properties Length: 347aa    MW: 38255.4 Da    PI: 5.9999
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028056597.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.29.7e-18240274135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  XP_028056597.1 240 CLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 274
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MENPEFFQGG YYNTQFTPEK RHSDTKTGGG GGGGGDHFII DDLLNYPNDD AVVADGGVFD  60
TFTGTSTESS TVTVVDSCNS SFSGGFTGDM GCRSLVDPHF CNDLCVPYDD LAELEWLSNF  120
VEESFSTEDL QKLQLISGMK ARTDTENCEF QPESNQNNPI FRPEGSVPGK ARSKRSRAAP  180
CNWTSRLLVL SPTTTMASPA SSEPDTETSD GKKTVKAAVK KQEGGDNPVP MANGGDGRKC  240
LHCATDKTPQ WRTGPMGPKT LCNACGVRYK SGRLVPEYRP AASPTFMLTK HSNSHRKVLE  300
LRRQKEMQRA QQNQQQYVHH QNMMFDASNG DDYLIHQHMG PDFRQLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.14e-87GATA family protein