PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028056252.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

ARR-B

Protein Properties

Length: 555aa MW: 62523.2 Da PI: 8.7992

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028056252.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	60.6	3.3e-19	200	253	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+ Wt LH++Fv+av++L G +kA+Pk+il++m+ + + ++ v+SHL +Y++ XP_028056252.1 200 KKRVIWTGVLHNKFVDAVRRL-GVDKAVPKKILQIMNEPMIPRSSVASHLYRYKI 253 68*****************.***************************9986 PP
2	Response_reg	77.2	6e-26	30	138	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+ + ++l++ +l+k +y +v+++++++eal++l++++ +D++++D+ m +m+G+ell+ i e ++p+i+++a++++e + + + G XP_028056252.1 30 VLVVDDNVVCLKLVAALLNKCRY-KVTATTKATEALKMLRKNKesYDIVITDVIMLDMNGFELLEIIGLEM-DVPVIMMSANDDQESVMKGVTHG 122 89*******************.***********888889****************996644.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a+d+l Kp+ ee+ + XP_028056252.1 123 ARDYLIKPVRLEEVKN 138 *******9999765 PP

Sequence ? help Back to Top
Protein Sequence Length: 555 aa Download sequence
MSKIDLHVSL NRAAPPQSRV NVNFPEGLRV LVVDDNVVCL KLVAALLNKC RYKVTATTKA 60 TEALKMLRKN KESYDIVITD VIMLDMNGFE LLEIIGLEMD VPVIMMSAND DQESVMKGVT 120 HGARDYLIKP VRLEEVKNIW QHVVWKNLFN TMKFGTMQAG TNQNPPIPSS KRQREKSNEE 180 EEEDDETNTH SNEESSAQKK KRVIWTGVLH NKFVDAVRRL GVDKAVPKKI LQIMNEPMIP 240 RSSVASHLYR YKIALRKENK KAKMSQESED NIDSNRTNGL LSDTITTSCI NQGLNTINHH 300 NRFAEQYIST GITSFGSQLQ TFGASTSNAK LLQQNQLPPK VVTDQMSPTV LGSVPPSPFF 360 ELNGMRFHSI NSRAKMFDDN VKMSSSQLPS FNTGQSGPSG MPVGFGPYSS FSNAWSCFKS 420 IESNFRPDSL AMLLPWQHEG RKLANLKVKE PIDSIRKAQF VQHRYPFENT EREINIHHNN 480 SSSFPDDDLL SIVVKQISNG TEHNTNTEEF VAMMTAVQRI MDTVNLRMAA QDEVIADLRR 540 TYRAPASTVH LIPTA

Sequence ? help Back to Top

Protein Sequence Length: 555 aa Download sequence

MSKIDLHVSL NRAAPPQSRV NVNFPEGLRV LVVDDNVVCL KLVAALLNKC RYKVTATTKA  60
TEALKMLRKN KESYDIVITD VIMLDMNGFE LLEIIGLEMD VPVIMMSAND DQESVMKGVT  120
HGARDYLIKP VRLEEVKNIW QHVVWKNLFN TMKFGTMQAG TNQNPPIPSS KRQREKSNEE  180
EEEDDETNTH SNEESSAQKK KRVIWTGVLH NKFVDAVRRL GVDKAVPKKI LQIMNEPMIP  240
RSSVASHLYR YKIALRKENK KAKMSQESED NIDSNRTNGL LSDTITTSCI NQGLNTINHH  300
NRFAEQYIST GITSFGSQLQ TFGASTSNAK LLQQNQLPPK VVTDQMSPTV LGSVPPSPFF  360
ELNGMRFHSI NSRAKMFDDN VKMSSSQLPS FNTGQSGPSG MPVGFGPYSS FSNAWSCFKS  420
IESNFRPDSL AMLLPWQHEG RKLANLKVKE PIDSIRKAQF VQHRYPFENT EREINIHHNN  480
SSSFPDDDLL SIVVKQISNG TEHNTNTEEF VAMMTAVQRI MDTVNLRMAA QDEVIADLRR  540
TYRAPASTVH LIPTA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31920.1	1e-70	ARR-B family protein