PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028055704.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 213aa MW: 24268.5 Da PI: 9.3773

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028055704.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.2	1.6e-17	9	56	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd +l d+++++G+g+W+++a+ g++R++k+c++rw++yl XP_028055704.1 9 KGLWTVEEDRILMDYITLHGKGRWNRVAKITGLKRCGKSCRLRWLNYL 56 678*******************************************97 PP
2	Myb_DNA-binding	60.7	3.1e-19	63	107	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g++++eEd+l+++++k+lG++ W++Ia +++ gRt++q+k++w+++l XP_028055704.1 63 GNFSEEEDDLIIRLHKLLGNR-WSLIAGRVP-GRTDNQVKNHWNTHL 107 89*****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 213 aa Download sequence
MEGEKGYKKG LWTVEEDRIL MDYITLHGKG RWNRVAKITG LKRCGKSCRL RWLNYLSPSV 60 KHGNFSEEED DLIIRLHKLL GNRWSLIAGR VPGRTDNQVK NHWNTHLSKK LGIRKGRSKT 120 GNSSRTKIST KVSENVNVAI DANSKPNYDC NVEAEDQKAI QDGSQSNVGL FEVEEPMLNE 180 YCQSPFWFSN ILHSPSLIGI LDQYSPDSVW HGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14750.1	1e-69	MYB family protein