PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028054460.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Trihelix

Protein Properties

Length: 442aa MW: 51295.9 Da PI: 6.4728

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028054460.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	65.3	1.3e-20	120	216	2	86
trihelix 2 WtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdq 84 Wt+++v++Li+a+++++e++ ++ +kk++W+ vs++m+erg +sp+q ++k+++ln+ryk+++e+ +++ +++++++ +++d XP_028054460.1 120 WTDKMVRLLITAVSYIGEDSATEYgkrmrgkhanlQKKGKWKLVSEVMAERGHYVSPQQSEDKFSDLNRRYKRLNEILGRGtSCQVVERPKLLDM 214 ************999999975333566667788********************************************66999999999988 PP trihelix 85 le 86 ++ XP_028054460.1 215 MD 216 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MEGNLSSGNM IPGGSSNRGL DLQGSMQVPH QQHPLTLQLH HSLPRQGSMV HPSIHENFPL 60 TLSSMQDCDQ TISLEDTLNG ERGKISATDE DEPSFMEDAV DGHNDANRGK TGIPWQRMNW 120 TDKMVRLLIT AVSYIGEDSA TEYGKRMRGK HANLQKKGKW KLVSEVMAER GHYVSPQQSE 180 DKFSDLNRRY KRLNEILGRG TSCQVVERPK LLDMMDYLSE KAKEEVKKIL SSKHLFYQEM 240 CSYNNGNRLH LPHDPELQRS LRLALKGRDD HENKHLQDDL DEGDQDAETD NHDEFEENYA 300 VCGDFRAIYE VHEGSAKRMK QCQGHEDISL GNSLNSLNCT FNFLPQNAQA DMNQMLKHRS 360 LKLEEQKLQI QAQMLELEKE RFKWQKFCRK GNWEFEMMRI VNERMKLDNM HMELDLKRKE 420 MDAELTITKW YFHTHPVLPK LV

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MEGNLSSGNM IPGGSSNRGL DLQGSMQVPH QQHPLTLQLH HSLPRQGSMV HPSIHENFPL  60
TLSSMQDCDQ TISLEDTLNG ERGKISATDE DEPSFMEDAV DGHNDANRGK TGIPWQRMNW  120
TDKMVRLLIT AVSYIGEDSA TEYGKRMRGK HANLQKKGKW KLVSEVMAER GHYVSPQQSE  180
DKFSDLNRRY KRLNEILGRG TSCQVVERPK LLDMMDYLSE KAKEEVKKIL SSKHLFYQEM  240
CSYNNGNRLH LPHDPELQRS LRLALKGRDD HENKHLQDDL DEGDQDAETD NHDEFEENYA  300
VCGDFRAIYE VHEGSAKRMK QCQGHEDISL GNSLNSLNCT FNFLPQNAQA DMNQMLKHRS  360
LKLEEQKLQI QAQMLELEKE RFKWQKFCRK GNWEFEMMRI VNERMKLDNM HMELDLKRKE  420
MDAELTITKW YFHTHPVLPK LV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-132	Trihelix family protein