PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028054175.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 419aa MW: 44501.9 Da PI: 7.3788

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028054175.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	132.6	3.6e-41	85	213	2	114
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s++ XP_028054175.1 85 PPKRTSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSTMSAPshfrtsy 179 789******************************************************************99987778888888655556666777 PP TCP 89 ........kaaksaakskksqksaasalnlakes 114 k ++ +++q+++ s+ + +++s XP_028054175.1 180 fnqslsslKPPPQRSDWEQQQQQQRSVDESQHQS 213 7766655533333333444444444344444444 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MEGENCMRRS NFPLQLLEKK EDEDEGENQT PCSSSSTYAS LAISGAATTT TNPQNWSHNS 60 TQQHQHQHQH QQQLAVADQA PKKPPPKRTS TKDRHTKVDG RGRRIRMPAT CAARVFQLTR 120 ELGHKSDGET IEWLLQQAEP AVIAATGTGT IPANFTSLNI SLRSSGSTMS APSHFRTSYF 180 NQSLSSLKPP PQRSDWEQQQ QQQRSVDESQ HQSRIFFPGA GLSSENSSTL LNFTTTCLDV 240 SGESSIGRKR RPPEQDLSLQ NHMGNYMLQS NSSSIPASHG QIPAGALWMM TNPSNQVMGG 300 GGGDSIWTLP SSSVGIGNAN LYRGSMASGL HFMNFPTPMA LLPGQHLGPG IGGGGSGGAV 360 AADGHLGMLA ALNAFRPLAE TGGSESQASG SNPHHGGGGR GGGGGDDHGN DTTTSHHHS

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MEGENCMRRS NFPLQLLEKK EDEDEGENQT PCSSSSTYAS LAISGAATTT TNPQNWSHNS  60
TQQHQHQHQH QQQLAVADQA PKKPPPKRTS TKDRHTKVDG RGRRIRMPAT CAARVFQLTR  120
ELGHKSDGET IEWLLQQAEP AVIAATGTGT IPANFTSLNI SLRSSGSTMS APSHFRTSYF  180
NQSLSSLKPP PQRSDWEQQQ QQQRSVDESQ HQSRIFFPGA GLSSENSSTL LNFTTTCLDV  240
SGESSIGRKR RPPEQDLSLQ NHMGNYMLQS NSSSIPASHG QIPAGALWMM TNPSNQVMGG  300
GGGDSIWTLP SSSVGIGNAN LYRGSMASGL HFMNFPTPMA LLPGQHLGPG IGGGGSGGAV  360
AADGHLGMLA ALNAFRPLAE TGGSESQASG SNPHHGGGGR GGGGGDDHGN DTTTSHHHS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	396	405	GGGGRGGGGG
2	397	406	GGGGRGGGGG
3	398	407	GGGGRGGGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	4e-47	TCP family protein