PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028054103.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Trihelix

Protein Properties

Length: 957aa MW: 108136 Da PI: 8.7986

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028054103.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	61.6	1.9e-19	873	953	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ +ev +Li++r +++r++ k+++ lWee+s+++ + g+ rsp qCk w +l ++y++ k ek+r +++pyf++++ XP_028054103.1 873 KWKPDEVTKLIKLRGLLHHRFQVVKRRMVLWEEISANLLADGIDRSPGQCKAQWTSLVQKYEESKCDEKSR-----ESWPYFEDMN 953 7******************************************************************96.....67****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 957 aa Download sequence
MAAFSALSLC PYRFSFRPNP NGYRISCSLA YPSTTGANGR KVPCKKSRRL EGAGKSMEDS 60 VQRKMEQFYE GSDGPPLRVL PIGGLGEIGM NCMLVGNYDR YILIDAGIMF PDYDDLGVQK 120 IIPDTRFIKK WSHKIEAVVI THGHEDHIGA LPWIRGEREQ VTPEQRSTRK EERARDERRE 180 SRERVIDVRA RERERERETR ARGKARGERD LQWSTGWRST GKRERFTVVD WMEIDAQVIR 240 ALDSHTPIFA SSFTMELIKK RLKEFGIFVP SRLKVFKARR RFNAGPFEIE PIRVTHSIPD 300 CCGLVLRCAD GTILHTGDWK IDESPVDGKV FDREALEELS KEGVTLMMSD STNVLSPGRS 360 LSEAVVAEAL MRRILAAKGR VLTTQFASNI HRLGSVKAAA DITGRKLVFV GMSLRTYLDA 420 AWKDGKAPID PSTLVKVEDI DAYAPKDLLI VTTGSQAEPR AALNLASYGS SHSLKLSKED 480 LILYSAKVIP GNETRVMKML NRISEIGSTI VMGKNEQLHS SGHGYREELD EVLKIVKPQH 540 FLPIHGELLF LKEHELLGKS TGIRHTIVIK NGEMLGVSHL RNRRVLSNGF LSLGKENLQL 600 MYSDGDKAFG TSTELNIEER LRIALDGIIV VSMEILRPQD ADDLTQKTLK GKIRITTRCL 660 WLDKGKLLDA LHKAAHAALS SCPVNCPLAH MERTVSEVLR KMVRKYSSKR PEVIAIAIEN 720 PSAVLSDELN ARLSGKSHVG SGISDLRKVV DGHTEKRQST EIEEEEGSSR MHSVNNTQQK 780 LKGHGIEDER LLSEEATTSG FESEERLSLD PEDSDDFWTK YIVTAPIDQL VKDSNGFVPQ 840 EEHKQKLEKE RKVDDSDEIP TQLKSSKPVK QNKWKPDEVT KLIKLRGLLH HRFQVVKRRM 900 VLWEEISANL LADGIDRSPG QCKAQWTSLV QKYEESKCDE KSRESWPYFE DMNKIFM

Sequence ? help Back to Top

Protein Sequence Length: 957 aa Download sequence

MAAFSALSLC PYRFSFRPNP NGYRISCSLA YPSTTGANGR KVPCKKSRRL EGAGKSMEDS  60
VQRKMEQFYE GSDGPPLRVL PIGGLGEIGM NCMLVGNYDR YILIDAGIMF PDYDDLGVQK  120
IIPDTRFIKK WSHKIEAVVI THGHEDHIGA LPWIRGEREQ VTPEQRSTRK EERARDERRE  180
SRERVIDVRA RERERERETR ARGKARGERD LQWSTGWRST GKRERFTVVD WMEIDAQVIR  240
ALDSHTPIFA SSFTMELIKK RLKEFGIFVP SRLKVFKARR RFNAGPFEIE PIRVTHSIPD  300
CCGLVLRCAD GTILHTGDWK IDESPVDGKV FDREALEELS KEGVTLMMSD STNVLSPGRS  360
LSEAVVAEAL MRRILAAKGR VLTTQFASNI HRLGSVKAAA DITGRKLVFV GMSLRTYLDA  420
AWKDGKAPID PSTLVKVEDI DAYAPKDLLI VTTGSQAEPR AALNLASYGS SHSLKLSKED  480
LILYSAKVIP GNETRVMKML NRISEIGSTI VMGKNEQLHS SGHGYREELD EVLKIVKPQH  540
FLPIHGELLF LKEHELLGKS TGIRHTIVIK NGEMLGVSHL RNRRVLSNGF LSLGKENLQL  600
MYSDGDKAFG TSTELNIEER LRIALDGIIV VSMEILRPQD ADDLTQKTLK GKIRITTRCL  660
WLDKGKLLDA LHKAAHAALS SCPVNCPLAH MERTVSEVLR KMVRKYSSKR PEVIAIAIEN  720
PSAVLSDELN ARLSGKSHVG SGISDLRKVV DGHTEKRQST EIEEEEGSSR MHSVNNTQQK  780
LKGHGIEDER LLSEEATTSG FESEERLSLD PEDSDDFWTK YIVTAPIDQL VKDSNGFVPQ  840
EEHKQKLEKE RKVDDSDEIP TQLKSSKPVK QNKWKPDEVT KLIKLRGLLH HRFQVVKRRM  900
VLWEEISANL LADGIDRSPG QCKAQWTSLV QKYEESKCDE KSRESWPYFE DMNKIFM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein