PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028053401.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 264aa MW: 30873.8 Da PI: 9.8113

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028053401.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	62	1.3e-19	22	69	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll+++vk++G g+W+++ar g++R +k+c++rw +yl XP_028053401.1 22 KGPWTAEEDRLLIEYVKLHGEGRWNSVARLAGLKRNGKSCRLRWVNYL 69 79********************************************97 PP
2	Myb_DNA-binding	51.8	1.9e-16	75	119	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T+ E+ +++++++++G++ W+tIar ++ gRt++++k++w+++ XP_028053401.1 75 RGQITPHEETIILELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 119 7888****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MSWGVMAQHL GWGVIQEEGW RKGPWTAEED RLLIEYVKLH GEGRWNSVAR LAGLKRNGKS 60 CRLRWVNYLR PDLKRGQITP HEETIILELH ARWGNRWSTI ARSLPGRTDN EIKNYWRTHF 120 KKKAKSDNNE KAKARLLRRQ QFQQQQRQPQ QQQPQQQQQQ ISQVDMKKIM SLFDESDNRV 180 PSSLPHQVRQ DMVTLYPNTT VEEQASFLYP QFNGYASGFE STNEDNMALW DGLWNLDDHV 240 YGNLSMACAA NKAGLHHTLA TPFY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24310.1	3e-90	MYB family protein