PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028053367.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family TCP
Protein Properties Length: 306aa    MW: 34564.2 Da    PI: 10.2083
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028053367.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP143.91.2e-44922412133
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa.......seceaesssssasnsssg. 88 
                     agkkdrhski T++g+RdRRvRls+++a +fF Lqd+LGfdk+sk+++WLl+++k+ai e    + +++       sece++s   ++++   + 
  XP_028053367.1  92 AGKKDRHSKIRTARGLRDRRVRLSIDIASKFFGLQDMLGFDKPSKALDWLLTKSKTAINEVKLMQKKHSllmpsptSECEQVSGGTNENS---Dd 183
                     89*********************************************************9988855555555544467744333333332...22 PP

             TCP  89 .............kaaksaakskksqksaasalnlakesrakarararertrekmrik 133
                                    + ++ k+ ++q++ a+++ l++esra arararertrekm+++
  XP_028053367.1 184 nggikdtvskikpLMNVEKDKKVQQQQHRAAFHLLSRESRAMARARARERTREKMCTR 241
                     3367799999998444444455566666666999999*******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MFSSNNSCTN PFPPSFHHHL SPPHFVGHDG PDIFLLHHHH HHPDPLLGDW LWDNFPVIDT  60
ISSSTIAASK QETTVHHCSS FPPQNVLPRK RAGKKDRHSK IRTARGLRDR RVRLSIDIAS  120
KFFGLQDMLG FDKPSKALDW LLTKSKTAIN EVKLMQKKHS LLMPSPTSEC EQVSGGTNEN  180
SDDNGGIKDT VSKIKPLMNV EKDKKVQQQQ HRAAFHLLSR ESRAMARARA RERTREKMCT  240
RRLNDPKEVV NDSSPPILNR STCLSQIEAY KGMDSNNHMV LRSGLTEDSV VKPSSVFNGQ  300
KDVSYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.26e-25TCP family protein