PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028052981.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 677aa MW: 77627.4 Da PI: 5.6732

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028052981.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	43.3	7.5e-14	494	533	5	44
RWP-RK 5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRW 44 isledl++ F +++kd+A +Lgv+ +++Kr+CR+y+I W XP_028052981.1 494 ISLEDLQQRFGMKLKDVAESLGVSRSTVKRACREYNITWW 533 89***********************************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 677 aa Download sequence
MAENEHSLRT EYLTDGDGIR DFPPDFKSYV KNTQLLCQRT AFNWGWVFWS GEDDPRERLP 60 PPPAFSELMA RIKSCFKDVI MDLLPTTQCL LQFWKVIEIG GKCLLTTRYQ PFGFNQINEG 120 LCGYRLISLD YEFDVDGVSD EHLGLLGRVF RHQQLESTPN VQYYSCNEYP QRDRAIICNI 180 KSSLVVPLFG FSRRCCIGVF EMVSTTEIIN SHLGSFFYSL LQIKGLPSSK CEHLNCEKVK 240 DETPEEIRKM LDVVYSTHHL PFAQTWSLCR LCNAVFKTYR TCHREGHMDD FLAVCALQQL 300 RRGKGIVGRA ISSQNLVFCK DVTQFSITEY PFAHYTRKFG FTGSFAICLR SSYIEDNVYT 360 LEFFLPPNYT EGRDLRTALV PLLTTMKQHC KSFKVASGEE LGEELSIEVL DFSEDGELYS 420 YQIPQTARSP NRMENGEQMD LDLFDQQLPE VDVVDTENNV VSNAEENNIV VTSVQQNCII 480 NLSQRLQRKA GIPISLEDLQ QRFGMKLKDV AESLGVSRST VKRACREYNI TWWSPGKRSK 540 DNQLLSNKGV VQEQILESSH PPFFDPLHMQ DMATASRTKP HFPTAQDTSI VTIKAKYGDD 600 FIKFQLPVLS GMVEFQQQVA KRLNLQGGTY RVKYQDEVND WILVVCDEDL QNYICNSISR 660 ERNTVTMLIQ PITNCPS

Sequence ? help Back to Top

Protein Sequence Length: 677 aa Download sequence

MAENEHSLRT EYLTDGDGIR DFPPDFKSYV KNTQLLCQRT AFNWGWVFWS GEDDPRERLP  60
PPPAFSELMA RIKSCFKDVI MDLLPTTQCL LQFWKVIEIG GKCLLTTRYQ PFGFNQINEG  120
LCGYRLISLD YEFDVDGVSD EHLGLLGRVF RHQQLESTPN VQYYSCNEYP QRDRAIICNI  180
KSSLVVPLFG FSRRCCIGVF EMVSTTEIIN SHLGSFFYSL LQIKGLPSSK CEHLNCEKVK  240
DETPEEIRKM LDVVYSTHHL PFAQTWSLCR LCNAVFKTYR TCHREGHMDD FLAVCALQQL  300
RRGKGIVGRA ISSQNLVFCK DVTQFSITEY PFAHYTRKFG FTGSFAICLR SSYIEDNVYT  360
LEFFLPPNYT EGRDLRTALV PLLTTMKQHC KSFKVASGEE LGEELSIEVL DFSEDGELYS  420
YQIPQTARSP NRMENGEQMD LDLFDQQLPE VDVVDTENNV VSNAEENNIV VTSVQQNCII  480
NLSQRLQRKA GIPISLEDLQ QRFGMKLKDV AESLGVSRST VKRACREYNI TWWSPGKRSK  540
DNQLLSNKGV VQEQILESSH PPFFDPLHMQ DMATASRTKP HFPTAQDTSI VTIKAKYGDD  600
FIKFQLPVLS GMVEFQQQVA KRLNLQGGTY RVKYQDEVND WILVVCDEDL QNYICNSISR  660
ERNTVTMLIQ PITNCPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	1e-77	Nin-like family protein