PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028052561.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | TCP | ||||||||
Protein Properties | Length: 150aa MW: 16821.1 Da PI: 9.0588 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 86.4 | 6.5e-27 | 22 | 92 | 3 | 73 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec 73 + k+ ++++h kv+gRdRRvR++++ca r+F+L++ LG+ + ++tieWLlqqa+p + ++ +++ + s+ XP_028052561.1 22 THKKASKDRHVKVNGRDRRVRIPVHCAERIFQLTKVLGHRTSGQTIEWLLQQAEPIVSKILYNTTVPLSDP 92 67999***************************************************999988844433222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 150 aa Download sequence |
MTILSTPSNH LSATKAAISK PTHKKASKDR HVKVNGRDRR VRIPVHCAER IFQLTKVLGH 60 RTSGQTIEWL LQQAEPIVSK ILYNTTVPLS DPSSSTPLAA KDAPAPSPEN HAFEVFEPGS 120 LSIHDYSFHM NYEAEFSVNE FVNMSFPMYF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72010.1 | 8e-26 | TCP family protein |